Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g05934 ATGGAGAAAGTTTGTGAATTCTGCACAGCACTGAGGCCACTTGTTTACTGTAATGCTGATGCAGCATATCTTTGTCTATCTTGTGATGCAAAGGTTCATTGGGCAAATGAATTGTCTGGTAGGCACATCCGGACCCTTGTGTGTAACTCGTGCAGATGCGATCTTGCTTATGTTCAGTGCTTGGATCACAAAATGTTAATCTGTCGAGACTGTGATCAAAAGTTGCACGATAGTTCTTCACCACATCGCAGACGAGCTGTTAAAACATTTATCGGCTGCCCTTCTGCCAAAGAGTTTGCAGCACTTTGGGGATTTGAATTTAAGGAGATTGAAAAGAGTGTTGTCAGTCGGAAGGATCAGTTTGCAGTTGCATCTATTTCTTCTGTTTCTACGGATGTGAATGTGATCAAGCATCATCGCATTCAAACTAGGGTCACCTCGACAGGGCCTGCGGCTAAACTTGATAAGGGATCCAGCAGTCAACAAGGTCAGATATTGTACGGTGATCAAGAGCGGCAAACTATTCTGCAGCAGATTGTTGATTTAAAACGGTTTCAGCTAAACGAGGAGAGTCATCATTCTACAAAGGTAAATGGACTACAAGTGGATGAGAAATTCAATCAGCAACTACAAAATTCCCATAATTTTGCTACTAATCTTCTGGGAGGAGACAATACTATTGCGGAGCTGAATCCGGAAACTTTCTCGTCCGCGTTTTCTCAGCTTGATAATTTGTCTTCATCTTCAATTATGGACTTTCCTTTGCATGGAGAGTTGTTTTGGACTTGCAAAAGCTCACTTCAAAGTAATCAGTTATGGCCGCAAAATATTCAAGACCTGGGAATATGCGAAGAACTTGTTTGTGGAGACGATTTTAAAATACCGGACGTTGATTTAACATTCCAAAACTATGAGGAACTATTTGGAGGAGACCAAGATCCAATTAGAGGAGTAATGTTTGGTGGAAAAGATGTCTCTTGCTCTTCTTTGGAGAATGATATATCAGTTGATAGTTCAGATATTGACAATCCAAGTGCAATGGAGGTTTGA 1050 0.4105 MEKVCEFCTALRPLVYCNADAAYLCLSCDAKVHWANELSGRHIRTLVCNSCRCDLAYVQCLDHKMLICRDCDQKLHDSSSPHRRRAVKTFIGCPSAKEFAALWGFEFKEIEKSVVSRKDQFAVASISSVSTDVNVIKHHRIQTRVTSTGPAAKLDKGSSSQQGQILYGDQERQTILQQIVDLKRFQLNEESHHSTKVNGLQVDEKFNQQLQNSHNFATNLLGGDNTIAELNPETFSSAFSQLDNLSSSSIMDFPLHGELFWTCKSSLQSNQLWPQNIQDLGICEELVCGDDFKIPDVDLTFQNYEELFGGDQDPIRGVMFGGKDVSCSSLENDISVDSSDIDNPSAMEV 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g05934 349 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 10 2 298 - -
Trre1g05934 349 CDD Bbox1_BBX-like 4 47 - -
Trre1g05934 349 SMART bboxneu5 48 87 IPR000315 GO:0008270
Trre1g05934 349 SMART bboxneu5 1 47 IPR000315 GO:0008270
Trre1g05934 349 ProSiteProfiles Zinc finger B-box type profile. 43 87 IPR000315 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g05934 Trre-Chr1 63766181 63767664 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g05934 1 344 C2C2-CO-like Transcription Factor Family AT1G68190 37.465 4.04e-67 213
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g05934 1 63766181 63767664 Trre1g05934 1 63766181 63767664 ECH