Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g05929 ATGGCTTGTGCTAAACTCAACTCTCTCTCTTCCCAATGGATCGCAAACAACCCTTTCTCTTCTCGCCGTGGATCTTCCGCCGCCCCTCGCGGTGTCTCTCTTCGGATCCGCGCCTCTTACTCCGATGAACTTGTTCAAACCGCTAAATCTGTTGCATCTCGCGGTCGTGGAATTCTTGCAATTGATGAATCAAATGCAACCTGTGGGAAGCGTTTGGCATCAATTGGATTGGACAATACCGAGGTTAATCGCCAGGCTTATAGGCAACTTCTGCTGACAACACCCGGTCTTGGTGAATATATTTCTGGTGCCATTCTTTTTGAAGAAACACTTTATCAGTCAACAACTGATGGGAAGAAGTTTGTGGATTGTCTCCGCGAGCAGAACATTGTACCTGGCATCAAAGTTGATAAGGGTTTGGTTCCTCTACCAGGGTCAAACGATGAATCTTGGTGCCAAGGGTTGGATGGATTGGCTTCTAGATCTGCTGAATACTACAAGCAAGGTGCCCGATTTGCCAAGTGGCGTACAGTTGTCAGCATTCCATCTGGTCCTTCGGCCTTGGCTGTTAAGGAAGCAGCTTGGGGACTTGCACGATATGCTGCTATCTCTCAGGACAACGGTCTTGTTCCAATAGTTGAGCCAGAAATTCTTCTTGATGGGGACCACCCAATTGAGAGGACACTGGAAGTTGCCGAAAAGGTATGGTCAGAAGTCTTCTTCTATTTGGCACAAAACAATGTCCTTTTTGAGGGAATTTTGCTCAAGCCTAGCATGGTTACACCCGGCGCTGAGCACAAGCAAAGGGCTTCTCCAGAAACCATCGCCAATTTTACACTAACCATGCTTAAAAGAAGAGTTCCTCCTGCAGTCCCCGGAATCATGTTTTTGTCAGGTGGACAATCAGAAGTTGAAGCAACACTAAATCTTAATGCGATGAACCAAAGTCCCAACCCATGGCACGTGTCTTTCTCATATGCACGAGCTCTGCAGAACACCGTTCTTAAGACATGGCAAGGTCGCCCTGAGAATGTAGAAGCAGCTCAAAAGTCTCTTTTGGTCCGCGCCAAAGCCAACTCCTTGGCTCAGCTTGGAAGATACTCCGCTGAAGGTGAAAATGAAGAAGCCAAGAAGGGAATGTTCGTCAAGGGCTACACCTACTAG 1164 0.4759 MACAKLNSLSSQWIANNPFSSRRGSSAAPRGVSLRIRASYSDELVQTAKSVASRGRGILAIDESNATCGKRLASIGLDNTEVNRQAYRQLLLTTPGLGEYISGAILFEETLYQSTTDGKKFVDCLREQNIVPGIKVDKGLVPLPGSNDESWCQGLDGLASRSAEYYKQGARFAKWRTVVSIPSGPSALAVKEAAWGLARYAAISQDNGLVPIVEPEILLDGDHPIERTLEVAEKVWSEVFFYLAQNNVLFEGILLKPSMVTPGAEHKQRASPETIANFTLTMLKRRVPPAVPGIMFLSGGQSEVEATLNLNAMNQSPNPWHVSFSYARALQNTVLKTWQGRPENVEAAQKSLLVRAKANSLAQLGRYSAEGENEEAKKGMFVKGYTY 387
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g05929 387 CDD FBP_aldolase_I_a 41 367 - -
Trre1g05929 387 Gene3D Aldolase class I 30 386 IPR013785 -
Trre1g05929 387 FunFam Fructose-bisphosphate aldolase 27 386 - -
Trre1g05929 387 SUPERFAMILY Aldolase 37 387 - -
Trre1g05929 387 NCBIfam fructose-bisphosphate aldolase class I 43 363 - -
Trre1g05929 387 PANTHER FRUCTOSE-BISPHOSPHATE ALDOLASE 38 387 IPR000741 GO:0004332|GO:0006096
Trre1g05929 387 ProSitePatterns Fructose-bisphosphate aldolase class-I active site. 248 258 IPR029768 -
Trre1g05929 387 Pfam Fructose-bisphosphate aldolase class-I 43 387 IPR000741 GO:0004332|GO:0006096
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g05929 Trre-Chr1 63684634 63687418 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g05929 38 387 Miscellaneous Gene Families AT3G52930 54.520 9.94e-132 380
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g05929 1 63684634 63687418 Trre1g05929 1 63684634 63687418 ECH