Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g05127 ATGTTAGCATTCACTTTCTTCATCCTCTTCTTCTCCGGTTTCTTCCAATTCCCTTCCGTTTCACCTTCTCTCCCACCCTTCCATGAATCCTTCACGCTCCCTTCTACAAATACCTCCTCTGTACCCTTCACCGATCTGGTTTCTTCCTTCAGGAAATGGGATTTGCAAGTGGGTTGTGCTAAATTCAGAGAAAAAACAAATGGGGTGTCTTTAAATCAGTCAAAGGTTGTTTCTTTGCAAGAATTTGGTGGTGATTCTGAATGTAAGGGTTTTAAGCTTACTCATGTTAGTGTTTTGGTTAAAGGGTGGACTTGGATTCCTGATAATTTGGATAATTTGTATTCTTGTCATTGTGGGTTGAGCTGTTTGTGGACCAAATCAAATGTTCTTGCTGATAAGCCTGATGCTTTGATGTTTGAAACTTCTACTCCTCCGATTCAGAGACGTGTGGGAGAACCACTTCGTGCGTATATGGACCTCGAAGCTGGCCGAAGGAGATCTGGTCGAGAGGATATATACATTAGTTACCATGCTGAAGATGATGTACAGTCAACCTATGCCGGTGCTCTGTTTCACAACGGCCGAAACTATCATGTCTCCAATACTAAAAGCAGTGATATCCTTGTTTATTGGTCTTCGTCGCGGTGTCTTTCTCAAAGGAATGAACTTGCCAAGAAACTTCTTGGCTTGCTGCCACATCATTCTTTTGGCAAGTGCCTGAACAATGTCGGTGGTCTAGATATGGCTCTTTCATTCTTTCCCGAGTGTGAAAAAGATGCAAATGCTAAACCAAAATGGTGGGATCATTTACATTGTGCCATGTCTCACTACAAGTTTGTTCTTGCAATCGAGAACACTTTCACCGATAGTTACGTGACAGAGAAGTTATATTATGCATTGGATTCAGGTGCAGTTCCTATCTATTTTGGTGCACCAAACGTCATGGATTTTGTTCCTCCACATTCAATAATAGATGGTAGAAAATTCAAATCAGTGGAAGAACTGGCTTCATACGTGAAGGCCGTAGCTAATGACCCAGTAGCCTATGCAGAATACCATGCATGGAGAAGGTGTGGTGTAATGGGTAACTATGCAAAAACACGAGCCGTGAGCCTCGACACATTACCATGCCGGTTATGTGAGCATACTAGCAGAAAAGGCGGAAGAAATGCAAGAAGCTAG 1182 0.4255 MLAFTFFILFFSGFFQFPSVSPSLPPFHESFTLPSTNTSSVPFTDLVSSFRKWDLQVGCAKFREKTNGVSLNQSKVVSLQEFGGDSECKGFKLTHVSVLVKGWTWIPDNLDNLYSCHCGLSCLWTKSNVLADKPDALMFETSTPPIQRRVGEPLRAYMDLEAGRRRSGREDIYISYHAEDDVQSTYAGALFHNGRNYHVSNTKSSDILVYWSSSRCLSQRNELAKKLLGLLPHHSFGKCLNNVGGLDMALSFFPECEKDANAKPKWWDHLHCAMSHYKFVLAIENTFTDSYVTEKLYYALDSGAVPIYFGAPNVMDFVPPHSIIDGRKFKSVEELASYVKAVANDPVAYAEYHAWRRCGVMGNYAKTRAVSLDTLPCRLCEHTSRKGGRNARS 393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g05127 393 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 94 385 IPR001503 GO:0006486|GO:0008417|GO:0016020
Trre1g05127 393 PIRSF FucT_plant 1 393 IPR017177 -
Trre1g05127 393 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 207 386 IPR001503 GO:0006486|GO:0008417|GO:0016020
Trre1g05127 393 FunFam Alpha-(1,4)-fucosyltransferase 155 361 - -
Trre1g05127 393 Gene3D - 153 363 IPR038577 -
Trre1g05127 393 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 84 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g05127 Trre-Chr1 57455570 57458241 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g05127 1 391 Xyloglucan Fucosyltransferase1 AT1G71990 68.367 0.0 579
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g05127 K14412 - gmx:100791990 658.677