Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g05126 ATGCTTGTAGTGCCACCCAAACCCATCAACACAATCACAATCACAATCATGTTAGCATTCACTTTCTTCATCCTCTTCTTCTCCGGTTTCTTCCAATTCCCTTCCGTTTCACCTTCTCTCCCACCCTTCCATGAATCCTTCACGCTCCCTTCTACAAATACCTCCTCTGTACCCTTCACCGATCTGGTTTCTTCCTTCAGGAAATGGGATTTGCAAGTGGGTTGTGCTAAATTCAGAGAAAAAACAAATGGGGTGTCTTTAAATCAGTCAAAGGTTGTTTCTTTGCAAGAATTTGGTGGTGATTCTGAATGTAAGGGTTTTAAGCTTACTCATGTTAGTGTTTTGGTTAAAGGGTGGACTTGGATTCCTGATAATTTGGATAATTTGTATTCTTGTCATTGTGGGTTGAGCTGTTTGTGGACCAAATCAAATGTTCTTGCTGATAAGCCTGATGCTTTGATGTTTGAAACTTCTACTCCTCCGATTCAGAGACGTGTGGGAGAACCACTTCGTGCGTATATGGACCTCGAAGCTGGCCGAAGGAGATCTGGTCGAGAGGATATATACATTAGTTACCATGCTGAAGATGATGTACAGTCAACCTATGCCGGTGCTCTGTTTCACAACGGCCGAAACTATCATGTCTCCAATACTAAAAGCAGTGATATCCTTGTTTATTGGTCTTCGTCGCGGTGTCTTTCTCAAAGGAATGAACTTGCCAAGAAACTTCTTGGCTTGCTGCCACATCATTCTTTTGGCAAGTGCCTGAACAATGTCGGTGGTCTAGATATGGCTCTTTCATTCTTTCCCGAGTGTGAAAAAGATGCAAATGCTAAACCAAAATGGTGGGATCATTTACATTGTGCCATGTCTCACTACAAGTTTGTTCTTGCAATCGAGAACACTTTCACCGATAGTTACGTGACAGAGAAGTTATATTATGCATTGGATTCAGGTGCAGTTCCTATCTATTTTGGTGCACCAAACGTCATGGATTTTGTTCCTCCACATTCAATAATAGATGGTAGAAAATTCAAATCAGTGGAAGAACTGGCTTCATACGTGAAGGCCGTAGCTAATGACCCAGTAGCCTATGCAGAATACCATGCATGGAGAAGGTGTGGTGTAATGGGTAACTATGCAAAAACACGAGCCGTGAGCCTCGACACATTACCATGCCGGTTATGTGAGCATACTAGCAGAAAAGGCGGAAGAAATGCAAGAAGCTAG 1230 0.426 MLVVPPKPINTITITIMLAFTFFILFFSGFFQFPSVSPSLPPFHESFTLPSTNTSSVPFTDLVSSFRKWDLQVGCAKFREKTNGVSLNQSKVVSLQEFGGDSECKGFKLTHVSVLVKGWTWIPDNLDNLYSCHCGLSCLWTKSNVLADKPDALMFETSTPPIQRRVGEPLRAYMDLEAGRRRSGREDIYISYHAEDDVQSTYAGALFHNGRNYHVSNTKSSDILVYWSSSRCLSQRNELAKKLLGLLPHHSFGKCLNNVGGLDMALSFFPECEKDANAKPKWWDHLHCAMSHYKFVLAIENTFTDSYVTEKLYYALDSGAVPIYFGAPNVMDFVPPHSIIDGRKFKSVEELASYVKAVANDPVAYAEYHAWRRCGVMGNYAKTRAVSLDTLPCRLCEHTSRKGGRNARS 409
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g05126 409 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 100 401 - -
Trre1g05126 409 FunFam Alpha-(1,4)-fucosyltransferase 171 377 - -
Trre1g05126 409 Pfam Glycosyltransferase family 10 (fucosyltransferase) C-term 223 402 IPR001503 GO:0006486|GO:0008417|GO:0016020
Trre1g05126 409 Gene3D - 169 379 IPR038577 -
Trre1g05126 409 PANTHER ALPHA- 1,3 -FUCOSYLTRANSFERASE 110 401 IPR001503 GO:0006486|GO:0008417|GO:0016020
Trre1g05126 409 PIRSF FucT_plant 4 409 IPR017177 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g05126 Trre-Chr1 57455570 57458289 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g05126 4 407 Xyloglucan Fucosyltransferase1 AT1G71990 66.667 0.0 586
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g05126 K14412 - gmx:100791990 661.759