Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g04927 ATGAATGAAAAATGCTGCTATGGACAAGAAGAAGAAAACCCTTCTTCTGATGTTATTACTCCAATGGAGAAAACAGAGTTGAATGCTCTGTATTCAGCTATTCAAGGCTTTGTTGGTAATTCATGGAATGGCTCAGATCTCTATCCAGATCCTTGTGGTTGGTCACCTATTCAGGGAGTTTCTTGTGATATCTTCAATGGACTTTGGTATGTCACAGTGATCAACATTGGACCTATTCATGAAAATTCTTTGGTTTGTGCTAATCAAAATTTGGAATTTAGACCAGAATTATTTCAGCTTAAGCACCTTAAAGTTCTATCATTCTTCAACTGTTTTCAATCACCAAATAGTCTTCCGGTTTCAATTCCTACCGAAAATTGGGAGAATCTTGCTGAAAACGTAGAATCCATAGAGTTTAGATCAAATCCTGGTCTCATTGGTAACATTCCTTCAACTTTTGGTTTACTCAAGAATCTTCAATCGTTAGTATTACTCGTATCCGGTAAAATACCACAAGAAATTGGAAATCTTGTGAAATTGAAGAGATTAGTTTTTTCTGGAAACAATTTTAGTGGCAATATTCCAGATATTTTTGGAGGGTTAAGTGATTTATTAATCCTTGATTTAAGTAGAAATTCATTTTCTGGAAATTTGCCTGTATCAATTGGAAGATTAATTTCAGCATTGAAGATTGATTTAAGTCATAATTATCTTGAAGGGAAGTTGATTAATGAATTTGGTAATCTTAAGAATTTGACACTTATGGATTTAAGGAATAATAGATTATGTTGTGGATTGGTTTTATCTTTACAAGAAATGAATTCATTGGAAGAAATGGTTTTATCAAATAATCCATTAGGTGGTGATATAAGGTTATTAAATTGGAAAAATCTTCAAAATTTGGTGATTTTGGAACTCTCTAACATGAATTTGACAGGTGAAATTCCTGAGTCATTATCAGAATTAAAGAAATTGAGATTTTTGGGACTTAATGATAACAACCTTACAGGTAAAATTTTACCAAAGCTAGAATCACTTCCTTATCTCAATGCACTTTACTTAAGTGGAAATAATCTTAAAGGAGAAATTCAATTTTCAAAAGGGTTTTTTGGTAAATTGGGAAGACGTTTTGGTGCTTGGAATAATCCTAAACTTTGCTATCCAATTGAAGTAATGTCAACAAGAAATGTTCCTTATGGAGTAAAGCCATGTCATCAAGAAGAAGAGGTTCATTTGGTAAAATCAAATGCCAAAAGTGAGATTATGATCAATGGTGATATGAACCATAATTCAAATTTCATAGCCTCTATGGGATTTTCTACTTCCACTACTAGTGGAAATTTCTTGTGGATTTTTATTATTATGAATCTAGTATATAGTTTTTAA 1386 0.3182 MNEKCCYGQEEENPSSDVITPMEKTELNALYSAIQGFVGNSWNGSDLYPDPCGWSPIQGVSCDIFNGLWYVTVINIGPIHENSLVCANQNLEFRPELFQLKHLKVLSFFNCFQSPNSLPVSIPTENWENLAENVESIEFRSNPGLIGNIPSTFGLLKNLQSLVLLVSGKIPQEIGNLVKLKRLVFSGNNFSGNIPDIFGGLSDLLILDLSRNSFSGNLPVSIGRLISALKIDLSHNYLEGKLINEFGNLKNLTLMDLRNNRLCCGLVLSLQEMNSLEEMVLSNNPLGGDIRLLNWKNLQNLVILELSNMNLTGEIPESLSELKKLRFLGLNDNNLTGKILPKLESLPYLNALYLSGNNLKGEIQFSKGFFGKLGRRFGAWNNPKLCYPIEVMSTRNVPYGVKPCHQEEEVHLVKSNAKSEIMINGDMNHNSNFIASMGFSTSTTSGNFLWIFIIMNLVYSF 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g04927 461 FunFam Piriformospora indica-insensitive protein 2 25 194 - -
Trre1g04927 461 SUPERFAMILY L domain-like 22 363 - -
Trre1g04927 461 Gene3D Ribonuclease Inhibitor 165 266 IPR032675 -
Trre1g04927 461 Gene3D Ribonuclease Inhibitor 267 390 IPR032675 -
Trre1g04927 461 FunFam Piriformospora indica-insensitive protein 2 195 292 - -
Trre1g04927 461 Gene3D Ribonuclease Inhibitor 23 164 IPR032675 -
Trre1g04927 461 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 25 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g04927 Trre-Chr1 55398268 55400521 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g04927 129 414 Receptor kinase-like Gene Family AT1G17750 33.846 1.17e-30 124
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g04927 1 55398268 55400521 Trre1g04927 1 55398268 55400521 ECH