Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g04922 ATGATAGTTAGGTTAGGAATTCTTATAGCTGCTTCAATTGCAGCCTATAAATTTCAGCAGAATGTGAATGGATCAAAATTAGAACATGGCGAAGTAAGGAATAGGAAACATCAAGATGAGGGCACAGAAGAGATGCAGTCCAATTGTTCTACTAATGGTGTCAACCAGAAAGAGAGGGAAGAGGAAGAGCAAGAAGAGGAGGTTAAGTTAATTAGCAGCATAATAAATCTAGCTAATGAATTTGACGATGAAATTCTATCTGAATTTGAAAGCCTTCTATCTGAGCAGATTGATTTTCCATTACTTGCCGACAAGACCAATGAGGCCAAGAAAGATGGAGATAACGAAACTGAAACGGAAAAAACTAGTGGTGAATTAGAACGGTTGCGGAATGTAGTCGAGGAACTAGAGGAGAGGGAAGTGAAACTTGAAAGTGAATTGCTCGAGTATTATGGTTTGAAAGAGCAGGTACCAGACATTGAGGAGCTACGAAGGCAGTTGAGTATTAAAACTGTTGAAATCGATATGCTTCATATGACAATTAAGTCCTTGGAGGAAGAGAACACTAAACTTCACGAAGAGCTCACATTTGGAGCTTCAGCAAATAGAGAACTTGAGGCTGCTAGAAATAAGATCGAGGAGCTGCAAAGGCAGATACGCATTGCGGCTAACCAAACAAAAGGTCAGTTGCTGTTGCTTAAACAAAAAGTTTCTGGTCTACAAAGAAAAGAAGAAGAGGCTGCGAAAAAAGATGCTGAGATCGAAAAGAAATTGAAAACTGTGAATGATTTAGAAGTTGAAGTTGTGGAGCTTAAGAGAAGAAATAAAGAACTTCAACACGAGAAGCGAGAATTAACTGTTAAACTTAATGCTGCCGAGTCTAGAATTGCAGAACACTCCAGTATGACAGAGAATGAAATTGTCGCCAAGGCAAACTCAGAAGTTGGAAGGCTAAGGCATGCAAATGAAGACCTACAAAAGCAAGTGGAAGGACTCCAGATGAATAGGTTTAGCGAAGTTGAAGAACTTGTATACCTTCGCTGGGTCAACGCATGCTTGAGATATGAACTCAGGAATTACAATGCACCTTCAGGAAAATCATTGGCTCGTGATCTAAACAACAGTTTCAACCCGAAATCACAAGAGAAAGCTAAACAGCTATTGTTAGAATATGCCGGATCTGAGCGCGGGCAATGTGATACAGATCTTGAAAGCAACTTCTTCCATGATCATTCTTCACCAGGCAGTGAAGATATTGACGGTGCATATATCTATAGCCCTACTTACAAATATAGTAATCTTAACAAGAAAACTAGCTTAATCCAAAAGTTGAAGAAATGGAATAAAAACAAAGATGATTCAAGTGCTCATTCATCGCCAGCTAGACCTCTTTCGATAGGCTCTCCTTGCAGGGTAAGTACGAGCTATAGACCAAGGAATACACTTGAATCCTTGATGCTAAGGAATGCTCATGATGCTGTAGCGATCACTACCTTCGGACAGAAGGAACATGGACCTACTCATTCTCCTGAAATTCCATCTCTTCCAAGCTTGAGAAAAGTTTCACCGAGTGATGACATTCTGGATTCTGTTTCGGCTTCGGCTTCATTCCAATTGATGTCTAAGTCAGTTGACAAATCTATGGATGAAAAATATCCTGCATATAAAGATCTTCATAAATTGGCATTAGCTAGGGAGAAACAACTTAAGGATAAGGCTGAGAAAGCGAGAGGAAAGAAGTTTCGCGACATTTCAAATCTTGATGTGAGCGAGGCAGAACAAGAGAGATCGATATCTTTGCAACCAAAACTTACTCAAGTAAATGAGAAGGATCAATCTGAAGATGGTAAGAATTTTGATAATCAAACCATTAGTAAGATGAAGCTTTTCGAAATTGAGAAAAGGCCTCCAAGGGTGCCTCGGCCACCACCTAACCCATTTGGCGGTGCTTCAGTTTCAAATTCTTTCAATGGAATACCATATGTTTCATCTATACCTCCGCCGCCACCACCACCACCACCACCAGGAAGTTTACCAAGAGGATCAGTAGTTGCTGACCAAGTTAAAAGGGCTCCCGAGCTTGTTGAATTTTATCAAACATTGATGAAACGGGAAGCAAAGAAGGATACCTCATCACTAACTTCATCGACAAGTAATTCAGCTGATGCCAGAAGCAACATGATTGGGGAAATTGAGAATAGATCAACATTTCTCTTAGCTGTGAAAGCTGATGTAGAAACACAAGGTGATTTTGTCATGGCTTTGGCAACGGAAGTTCGAGCAGCCTCTTTTTCGAGGATTGAAGATGTAGTCGCTTTTGTGAACTGGCTAGATGAAGAACTCTCTTTCTTGGGTGATGAACGAGCTGTTCTCAAGCACTTCGATTGGCCTGAAGGGAAATCAGATGCACTACGAGAAGCATCTTTTGAATATCAGGATCTGATGAAATTGGGGAAGCAAGTCTCCACTTTCACCGATGATCCAAAACTCCCATGTGACGTTGCTTTGCAGAATATGTACTCATTACTTGAAAAAGTAGAGCAAAGTGTATATGCACTTTTACGGACAAGAGATTTCGCCATTTCACGGTACAAAGAGTTTGGATTACCTGTAAATTGGCTATTAGATTCGGGAGTTGTGGGAAAGATCAAGCTTTCTTCTGTTCAACTGGCAAACATGTATATGAAGCGTATTGCATCTGAACTTGATATACTATCTGGTCCCGAAATTGAACCGACAAAAGAGTTTTTAATTCTGCAAGGCGTGCGCTTTGCTTTCCGTGTTCATCAGTTTGCAGGAGGCTTTGATACAGAGAGCATGAAAGCTTTTGAAGAACTAAGAAACAGAATTCATGATCAAGCAAGTGAACATAATAATAAACCAGAAACGCCGACAGAGAGTGATCAATAA 2910 0.4031 MIVRLGILIAASIAAYKFQQNVNGSKLEHGEVRNRKHQDEGTEEMQSNCSTNGVNQKEREEEEQEEEVKLISSIINLANEFDDEILSEFESLLSEQIDFPLLADKTNEAKKDGDNETETEKTSGELERLRNVVEELEEREVKLESELLEYYGLKEQVPDIEELRRQLSIKTVEIDMLHMTIKSLEEENTKLHEELTFGASANRELEAARNKIEELQRQIRIAANQTKGQLLLLKQKVSGLQRKEEEAAKKDAEIEKKLKTVNDLEVEVVELKRRNKELQHEKRELTVKLNAAESRIAEHSSMTENEIVAKANSEVGRLRHANEDLQKQVEGLQMNRFSEVEELVYLRWVNACLRYELRNYNAPSGKSLARDLNNSFNPKSQEKAKQLLLEYAGSERGQCDTDLESNFFHDHSSPGSEDIDGAYIYSPTYKYSNLNKKTSLIQKLKKWNKNKDDSSAHSSPARPLSIGSPCRVSTSYRPRNTLESLMLRNAHDAVAITTFGQKEHGPTHSPEIPSLPSLRKVSPSDDILDSVSASASFQLMSKSVDKSMDEKYPAYKDLHKLALAREKQLKDKAEKARGKKFRDISNLDVSEAEQERSISLQPKLTQVNEKDQSEDGKNFDNQTISKMKLFEIEKRPPRVPRPPPNPFGGASVSNSFNGIPYVSSIPPPPPPPPPPGSLPRGSVVADQVKRAPELVEFYQTLMKREAKKDTSSLTSSTSNSADARSNMIGEIENRSTFLLAVKADVETQGDFVMALATEVRAASFSRIEDVVAFVNWLDEELSFLGDERAVLKHFDWPEGKSDALREASFEYQDLMKLGKQVSTFTDDPKLPCDVALQNMYSLLEKVEQSVYALLRTRDFAISRYKEFGLPVNWLLDSGVVGKIKLSSVQLANMYMKRIASELDILSGPEIEPTKEFLILQGVRFAFRVHQFAGGFDTESMKAFEELRNRIHDQASEHNNKPETPTESDQ 969
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g04922 969 Coils Coil 174 194 - -
Trre1g04922 969 Coils Coil 119 153 - -
Trre1g04922 969 Coils Coil 198 225 - -
Trre1g04922 969 MobiDBLite consensus disorder prediction 28 43 - -
Trre1g04922 969 MobiDBLite consensus disorder prediction 591 607 - -
Trre1g04922 969 Coils Coil 240 302 - -
Trre1g04922 969 PANTHER PROTEIN CHUP1, CHLOROPLASTIC 87 951 IPR040265 -
Trre1g04922 969 MobiDBLite consensus disorder prediction 449 475 - -
Trre1g04922 969 MobiDBLite consensus disorder prediction 588 623 - -
Trre1g04922 969 MobiDBLite consensus disorder prediction 105 125 - -
Trre1g04922 969 MobiDBLite consensus disorder prediction 634 653 - -
Trre1g04922 969 MobiDBLite consensus disorder prediction 658 682 - -
Trre1g04922 969 MobiDBLite consensus disorder prediction 457 475 - -
Trre1g04922 969 MobiDBLite consensus disorder prediction 500 523 - -
Trre1g04922 969 MobiDBLite consensus disorder prediction 662 679 - -
Trre1g04922 969 Coils Coil 54 74 - -
Trre1g04922 969 Coils Coil 308 335 - -
Trre1g04922 969 MobiDBLite consensus disorder prediction 28 64 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g04922 Trre-Chr1 55356310 55360623 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g04922 1 55356310 55360623 Trre1g04922 1 55356310 55360623 ECH