Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g04907 ATGATTCTAATTCTACCCCATTTCCTTCTCACATTCTTATCCATCATCACCACCACCATCTCCACCTCCACTCTAATCCCATCTCCCCAACCCTTTCCTTACGGCAATTTGTCCTCCTACCACATTAACTGCGGCACTTCAACTAACACATCTGACCACTTCAACACAACATGGCTCTCCGACCGTTACTACACCGGCGGCTCAACCTCCGTCATATCGGAGCCACTCCGTTTCAATCTCCCCTCGGAAAAAACCCTCCGTTACTTCTCTTCTTCTTCCAACGGCAAAAAAAACTGCTACTCTTTCCCCTCTCTCCCTTCTGCTCGTTACCTTCTCCGTACTTTCACCGTCTACGATAACTACGACGATAAGTCTCGTCCTCCTTCCTTCGATGTTGCACTCTCCGCCACCATCATTTTCAACTGGCGTTCACCCTGGCCTGAATCGACTTCTCGTGACGGTGCTTACTCTGATCTCTTTGCCTTTCTCACCACTCCTTCTACCGCCGATCTTTGCTTTTACGGTTTCGCTACCGATGCTCCGATTGTTTCCTCGATTGAGCTTGTTCCTGTTGATTCATCTTCATACGATTCTCCCTCCACCGGTGAAAATCTTATTCTCGTTAACTACGGTAGAATTTCATGCGGTTCTGATGATCATTTTGGTCCTGGTTTCACCAACGACAGTGACAAATTCGGCCGGTCATGGCAACCGGATGAACCATTCCGAACCGGATCGGATAGAACCTTTCGAGTTTTGTTAACGGAGAATACCATTAACGGCACTGATAAAGAACCGAACTATTTTCCGATGAAGCTTTATCAAACGGCTGTGACGTCAGAGGAGGATAAATTGGAGTACGAATTGAGTGTGGATGCGAAGATGGACTATATGGTGTGGCTGCATTTTGCTGAAATTGATTCTAGTGTGCAAAAAGCTGGAGAAAGAGTTTTTGATGTGTTCATCAATGGAAACAATGTGACAAGAGTTGATATATACAAAGAAGTGGGAAGTTTTACTGCTTTTACTTGGCATTACACTGTTAGAAACTTGAGCAGTAACTTTTTGGGGATTAAGCTTGTAGCTGTTTCTGGTGCTCCTTTGATTAGTGGTTTTGAGAATTATGCATTGGTGCCTAATGAACCTTCAACTCACCCTCTTCAAGTAAGTGCAATGAAGGCATTGAAGGAATCGCTTCGTGTTCCGGGTAGAATGGGATGGAATGGTGATCCATGTGCTCCTACAACTTGGGATGCTTGGGAGGGTGTTACCTGCCGTATGAGTGACGATAAAACTGCTCTCCTCATTACTGAAATAAATCTTGGCAGTCAAGGCCTAAAAGGGAACATCAGTGACCAGATTGGTCTTTTATCTGACTTAGTAAGCCTGAACTTGAGTTCTAATTCCTTGGGAGGCGAAATACCATCAGGATTAGGACAAAAATCCCTGATTCAAGTGGATTTATCCAACAATCAGTTAACCGGGTCTATACCTGACAGTTTGGCATCTTCAAATCTGCAGCTTGTGCTATTGAATGGTAACCTATTGGAAGGACGAGTGCCAGACCAACTTTATTCTGTTGGCGTGCACGGTGGAGCTATCGATCTCTCTGGCAACAAGGGTTTGTGCGGTGTACCATCTCTACCATCATGTCCTATGTTTTGGGAGCATGGCGGATTATCGAGTCCTGGTAAAATTGCTATAGGCTTGTCATGTCTTTTTATTTCCTGCGTGGTACTGCTGCTGGTATATATCTACATCAGAAGGAAAAAGAACGATTATGACTTTGGTCTACCCCATGAAATAATGGCTCTAGCGGCGAAGAGAAACAAATATCAGAGGCAGAAATCGTTGATGCTTCTTGAGCTGGAGAGTCAACACGCTAGGGGATTCCCTTCGCCTTTTACTCCACAATAA 1917 0.4481 MILILPHFLLTFLSIITTTISTSTLIPSPQPFPYGNLSSYHINCGTSTNTSDHFNTTWLSDRYYTGGSTSVISEPLRFNLPSEKTLRYFSSSSNGKKNCYSFPSLPSARYLLRTFTVYDNYDDKSRPPSFDVALSATIIFNWRSPWPESTSRDGAYSDLFAFLTTPSTADLCFYGFATDAPIVSSIELVPVDSSSYDSPSTGENLILVNYGRISCGSDDHFGPGFTNDSDKFGRSWQPDEPFRTGSDRTFRVLLTENTINGTDKEPNYFPMKLYQTAVTSEEDKLEYELSVDAKMDYMVWLHFAEIDSSVQKAGERVFDVFINGNNVTRVDIYKEVGSFTAFTWHYTVRNLSSNFLGIKLVAVSGAPLISGFENYALVPNEPSTHPLQVSAMKALKESLRVPGRMGWNGDPCAPTTWDAWEGVTCRMSDDKTALLITEINLGSQGLKGNISDQIGLLSDLVSLNLSSNSLGGEIPSGLGQKSLIQVDLSNNQLTGSIPDSLASSNLQLVLLNGNLLEGRVPDQLYSVGVHGGAIDLSGNKGLCGVPSLPSCPMFWEHGGLSSPGKIAIGLSCLFISCVVLLLVYIYIRRKKNDYDFGLPHEIMALAAKRNKYQRQKSLMLLELESQHARGFPSPFTPQ 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g04907 638 FunFam Putative LRR receptor-like serine/threonine-protein kinase 387 552 - -
Trre1g04907 638 Gene3D - 210 376 - -
Trre1g04907 638 Gene3D - 38 191 - -
Trre1g04907 638 PANTHER OS07G0107800 PROTEIN-RELATED 41 609 - -
Trre1g04907 638 FunFam Di-glucose binding protein with Leucine-rich repeat domain 212 375 - -
Trre1g04907 638 SUPERFAMILY L domain-like 388 526 - -
Trre1g04907 638 Pfam Malectin-like domain 42 376 IPR024788 -
Trre1g04907 638 Gene3D Ribonuclease Inhibitor 388 552 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g04907 Trre-Chr1 55135215 55140106 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g04907 44 618 Receptor kinase-like Gene Family AT2G14440 25.497 1.79e-34 138
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g04907 1 55135215 55140106 Trre1g04907 1 55135215 55140106 ECH