Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g04711 ATGGTATGGCTTGGGTTTACTTCAAATGGGACCAAACCTTCATTGGTCATCTTTGCCATAGTTTTCTCTCTACTCATATTAACACTCACTTTTGGTAATTTTGAGTGGTTTTCCATTATACTAAATGGAAGAGATCAAAATGTGACAGCAGAAGATTTTTCATCAAGGAAAATCACATGTAATGGGTTGCAAACCAAGAATTTTACAGAGTCATATGTTGGTTCAAAAAACAGTTCATCAGCATCAACAGAAAGTCATGCTGACAAACTCCTTGATGGCCTTCTCTCTTCTGAATTTGATAAAGAATCATGCTTAAGCAGATTTCAAGCTTACTTATACCGCAAGGTATCGCCTCATAAACCTTCTCCGTATCTCATATCAAAACTTCGTAGCTATGAAGGTCTTCACAGAAGATGTGGACCTCATAGTAAAGCTTACAAGAGAACCATGGTAAAGCTCAAAAGATTCAATTCCAATCAATCCAATGCTACTGCCGGATCATGCAAGTACATAGTATGGACAGCTGCTAATGGCTTAGGGAATAGAATGGTGAGCATGGCTTCAACTTTCCTATATGCGATCCTCACCGATCGAGTCCTATTAGTAGAGTTTCATGATGATATGGTTGGCCTATTTTGTGAACCATTCCCTAATTCATCATGGATATTGCCTAAACATTTTCCTTTTAGTGACAATAGAAAAGTAGAAATATATGAAAGCATGCTAAAAAGGGACAAAGAAAACACTTCAAAGAAGTTACTATTACCATCGACTATAGGAGTACGTCTAAATATGTATCATTCGATTCATGATCATGAACTTTTTTTCTCTTGTGATCATAACCAACATCTTCTACATAAAGTACCTCTCTTGATTATAACATCAGATCAATATTTTGTACCTTCTCTTTTTATGATTCCATCATTTAACCAACAGCTTAACAACATGTTCCCAAACAAAGAGACAGTTTTTCACCATTTAGGACGTTACCTATTTCTCCCTTCAAACGATGTATGGGGACCGATCAAAAGATTCTATCAAGCGTATTTAGCCAATGCAGAAGAGAAGATTGGAATCCAAATAAGAGTATTCAATCCTGATCTCACACCTTATGAAACAATCATGGGTCAAGTTTTGAAATGCACCCAAAATCATACTATACTACCTGGTTTCGCCACAAATTTGTCAAATGACCCTCCATTGAAAAATCAGATTTTGAAGTCTGTTTTGGTAACATCATTATATCCACAATATGGTGAGAATCTTAGGACTATGTATTTGAACAAACCAACTGTTACAGGTGAAATCATAGCAGTTCATCAGCCAAGTCATGAAGATCATCAAAAATTTGGTGATAACTTGCATAACAAGAAAGCATTGAGAGACATGTATCTATTAAGTTTGTGTGATGTTTTAGTAACTAGCTCATTATCAACTTTTGGGTATGTGGCTCAGGGTTTGGGAGGCGTAAAGCCATTGGTTCTTAAAAAATTACTAGACAGCAACATCCCGGATTCGCCTTGTTCGCAAGATTTCTCTATGGAGCCTTGTTTTCATATTACTCCTAAACTTGATTGCATGGAAAAACCTATAGATGATATTGGCACAATGTTTCCTTACATGAAGAAATGTGTTGATTATAAAAGGGGTGTCAAGTTGGTCAATGATATTCAATAG 1677 0.3614 MVWLGFTSNGTKPSLVIFAIVFSLLILTLTFGNFEWFSIILNGRDQNVTAEDFSSRKITCNGLQTKNFTESYVGSKNSSSASTESHADKLLDGLLSSEFDKESCLSRFQAYLYRKVSPHKPSPYLISKLRSYEGLHRRCGPHSKAYKRTMVKLKRFNSNQSNATAGSCKYIVWTAANGLGNRMVSMASTFLYAILTDRVLLVEFHDDMVGLFCEPFPNSSWILPKHFPFSDNRKVEIYESMLKRDKENTSKKLLLPSTIGVRLNMYHSIHDHELFFSCDHNQHLLHKVPLLIITSDQYFVPSLFMIPSFNQQLNNMFPNKETVFHHLGRYLFLPSNDVWGPIKRFYQAYLANAEEKIGIQIRVFNPDLTPYETIMGQVLKCTQNHTILPGFATNLSNDPPLKNQILKSVLVTSLYPQYGENLRTMYLNKPTVTGEIIAVHQPSHEDHQKFGDNLHNKKALRDMYLLSLCDVLVTSSLSTFGYVAQGLGGVKPLVLKKLLDSNIPDSPCSQDFSMEPCFHITPKLDCMEKPIDDIGTMFPYMKKCVDYKRGVKLVNDIQ 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g04711 558 Gene3D - 165 250 - -
Trre1g04711 558 FunFam Galactoside 2-alpha-L-fucosyltransferase 166 217 - -
Trre1g04711 558 PANTHER FUCOSYLTRANSFERASE 2-RELATED 19 555 IPR004938 GO:0008107|GO:0016020|GO:0042546
Trre1g04711 558 Gene3D - 341 495 - -
Trre1g04711 558 Pfam Xyloglucan fucosyltransferase 79 526 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g04711 Trre-Chr1 53095143 53097141 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g04711 67 554 Xyloglucan Fucosyltransferase1 AT2G03220 49.095 1.77e-164 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g04711 K13681 - gmx:100809919 552.747