Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g04710 ATGGTATGGTTTGGATTTACTTCAAATGGGACCAAACCTTCATTGGTCATCTCTGTCATAGCTTTGTCTCTACTCATATTAACACTCACTTTTGGTAATTTTGAGTGGTTTTCAACTATACTAAATGGAAGAGATCAAAATGTCACAACAACAGATTTTTCATCAAGAGAAATCACATGTAATGTGTTGCAAATCAAGAACTTTACAGAATCATATGTTGGTTCAAAAAACAGTTCATCACAATCAACAGAAAGTCATGCTGACAAACTCCTTGATGGGCTTCTCTCTTCTGAATTTGATAAAGGATCATGCTTAAGCAGATTTCAAGCTTACTTATACCGCAAGGTATCGCCTCATAAACCTTCTCCGTATCTCATATCAAAACTTCGTAGCTATGAAGATCTTCACAGAAGATGTGGACCTCATAGTAAAGCTTACAAGAGAACCATGGTAAAGCTCAAAAGATTCAAATCCAATAAATCCAATGTTACTACTACTGGATCATGTAAGTACATGGTATGGACAGCTGCGAATGGTGAGCATGGCTTCAATTTTCCTATATGCGATCCTCACCGATCGAGTCCTATTAGTAGAGTTTCATGA 603 0.3682 MVWFGFTSNGTKPSLVISVIALSLLILTLTFGNFEWFSTILNGRDQNVTTTDFSSREITCNVLQIKNFTESYVGSKNSSSQSTESHADKLLDGLLSSEFDKGSCLSRFQAYLYRKVSPHKPSPYLISKLRSYEDLHRRCGPHSKAYKRTMVKLKRFKSNKSNVTTTGSCKYMVWTAANGEHGFNFPICDPHRSSPISRVS 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g04710 200 PANTHER FUCOSYLTRANSFERASE 2-RELATED 21 179 IPR004938 GO:0008107|GO:0016020|GO:0042546
Trre1g04710 200 Pfam Xyloglucan fucosyltransferase 77 179 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g04710 Trre-Chr1 53091837 53092730 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g04710 81 179 Xyloglucan Fucosyltransferase1 AT2G15370 55.000 1.27e-30 115
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g04710 K13681 - gmx:100809919 130.954