Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00400 ATGAAGAACAAAAACAACCTCAACATAGTCACAAAGAACAATTACAACACTTCCATCATCATCAATCCAAAATCACTTCCAATGGATCCCAAAATTTGGAGCAAATTACCACCTGAAATCCTTGAATTCATTCTCTCTTTTCTTCCTCTCAAAACTTTCATGTCTTTAAGATCAACTTGCAAAGGTTTTTGGCCATTGATTTTCTCTCCTTCATTCATCTCAAAACATTCACCTTCATCTTCACCTTTCTCTTCTTTTCTCTTACTTTCTCACCCTCAATTCCACCGTCACTTTCCTCTCTATGATTGTAACCTTGGAACATGGCGTAATGTTTCTCTTTCATTCTCTGATTCACTTCACTCTTCACCTTCTTACACTACTCTTGTTTCTTCTGGTGGTCTTTTTTGTTTATCAGATTCAATTTCATGTTCTTTACTTGTTTGTAATCTTTTAGCTAAATCCAAAAGAAAAATTCAATACCCAAATTTCAATCTTCACATTGAACATCTTACATTTGTTACAACTCCAAAAGGGTACATCATTTTTATACTATCTTCTGAATCAAATTCAAATAGTGTTTTTCTTTATGAATCAAGCTCAAAGATTCAATCTTGGAAGAAATTCAATGGTTTTGGTCCATTTTTAAGTGATAATCCTCATCAACAAGGTGTTTACTTTAAAGGGTGTTTGTATTTTGCTACACCAGAACCTTTTTCTGTTGTGTATTTTGATTTGGAGAATGGAAAATGGGAAAAATCTATTGGCGGTTTACCTAATCAACTCACTTTTGTTAGATTGGTTAGTATGAATGATGATGGTATTGAAGGTAAAAAATTGTTCTTGATTGGTGGGGTTGGGAACAATGGAATTTCAAGGAGTATTAAATTGTGGGAAATGAATGATGAAGGGAATTGGGTTGAGATTCAAAGTTTGCCTGATCTTATGTATACTCGCGGAGGCACTGCGACAAAAAAATATCAAAATATGATGTTTGGTGGAATAGATGTAGATTTGGCGGAATACACAGGAGTCGATAAATGA 1041 0.3401 MKNKNNLNIVTKNNYNTSIIINPKSLPMDPKIWSKLPPEILEFILSFLPLKTFMSLRSTCKGFWPLIFSPSFISKHSPSSSPFSSFLLLSHPQFHRHFPLYDCNLGTWRNVSLSFSDSLHSSPSYTTLVSSGGLFCLSDSISCSLLVCNLLAKSKRKIQYPNFNLHIEHLTFVTTPKGYIIFILSSESNSNSVFLYESSSKIQSWKKFNGFGPFLSDNPHQQGVYFKGCLYFATPEPFSVVYFDLENGKWEKSIGGLPNQLTFVRLVSMNDDGIEGKKLFLIGGVGNNGISRSIKLWEMNDEGNWVEIQSLPDLMYTRGGTATKKYQNMMFGGIDVDLAEYTGVDK 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00400 346 SUPERFAMILY Galactose oxidase, central domain 98 321 IPR011043 -
Trre1g00400 346 Gene3D - 32 75 - -
Trre1g00400 346 Pfam F-box domain 33 63 IPR001810 GO:0005515
Trre1g00400 346 SMART fbox_2 36 76 IPR001810 GO:0005515
Trre1g00400 346 PANTHER BNACNNG10540D PROTEIN 25 316 - -
Trre1g00400 346 Gene3D - 91 343 IPR015915 GO:0005515
Trre1g00400 346 ProSiteProfiles F-box domain profile. 30 76 IPR001810 GO:0005515
Trre1g00400 346 SUPERFAMILY F-box domain 29 105 IPR036047 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00400 Trre-Chr1 2857235 2858558 Dispersed/Wgd