Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00387 ATGGCGTCAAGTTTTGATCGGTGGGAAAAAGATCCATTCTTTAACGCTGCTGAAGAAGTTCAGGAATCTGCAGATAGGATGGAATCTACATATAGGACATGGATACATGCCACCAAAGATAGTTCTAGCATGTGGAACCCTATTGAACTCCGAAGAGATTTACTTACTACCCTTGGTACTGCTAAATGGCAGTTAGAGGAATTTGAACGCGAAGTTAAGTCAAGTTATAGTAGAAACCTAGGTGCTGATGCTAGAACTAGGCACCGAGATTTTATCACTGCTATTGACGAAAAGATTAAAAAAGTTGAGCATTCGTTAAATGAATCGAGCCCTTCGGGTGGCAAGGAATCTAAGCCATGGGTGTGTTTGGACGAAGGAGAAAAAGATGAACTCGCTTTTTTTCTTTCAGGAATGCCACTAGCAGCTGAAAGCAACAATCCACAATTATCTGATATGAATTCAGTTTCACCTGGTGTTGGGGAAGAAAAGGAGGATGTATCACATGGGCATCGTAGGGCAGCTAGTGCTAGCGCTGATATTAGTTGTTGGAAAATTTCAGTTTCCGATGATCCGCAGCAGTTGAGTTCCTCCAGTGGTTCGTCTGGTGCAATGCATAAGGTGCCCAGTTTATCGGGATTTTTTAGTTCCGTGGAATCTATCTCCAAATTGAAGTGGCCTAAGAATGGTTATGGTTATAGAAAACTGAAAACAGTGGCCCATCATAAAGAAACTGATAGTGCACTAATTCCAATGGCTGAATTGAATAGAGGCACCAATGCATTCTATGAAAGAAGTAAAAGTAGCCACGATAGTTCCGATGAATGGTATAACAAGCAACTCTATGGATGGTGTGGTGCTATTCAGAGACAGCTCCAAAGATCTCAATACCAAATACAATACAGTCGGCTTGCTCGAGTAACAGTTTCAATTTTTTTTCTCCTTTGCTTGATTGGTAAGCTCTTGTTATAA 969 0.4107 MASSFDRWEKDPFFNAAEEVQESADRMESTYRTWIHATKDSSSMWNPIELRRDLLTTLGTAKWQLEEFEREVKSSYSRNLGADARTRHRDFITAIDEKIKKVEHSLNESSPSGGKESKPWVCLDEGEKDELAFFLSGMPLAAESNNPQLSDMNSVSPGVGEEKEDVSHGHRRAASASADISCWKISVSDDPQQLSSSSGSSGAMHKVPSLSGFFSSVESISKLKWPKNGYGYRKLKTVAHHKETDSALIPMAELNRGTNAFYERSKSSHDSSDEWYNKQLYGWCGAIQRQLQRSQYQIQYSRLARVTVSIFFLLCLIGKLLL 322
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00387 322 PANTHER OS05G0443700 PROTEIN 1 316 - -
Trre1g00387 322 FunFam Syntaxin 10 8 109 - -
Trre1g00387 322 SUPERFAMILY t-snare proteins 10 108 IPR010989 GO:0016020|GO:0016192
Trre1g00387 322 CDD SNARE_NTD_STX6-like 11 107 - -
Trre1g00387 322 Pfam Syntaxin 6, N-terminal 11 103 IPR015260 GO:0016020|GO:0048193
Trre1g00387 322 MobiDBLite consensus disorder prediction 144 171 - -
Trre1g00387 322 Gene3D - 9 110 - -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Trre1g00387 Trre-Chr1 2764169 2765630 Tandem
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g00387 1 2764169 2765630 Trre1g00387 1 2764169 2765630 ECH
Trre1g00387 1 2764169 2765630 Trre5g04913 5 50862516 50864635 PCT