Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00378 ATGTCCGACCCGGAAACCAAACCCGATCAAGAATCCTCACTCGCTCCACCGTCCTCAACTGTTGCATCACCGCCGCAACCGAATTTCAACGCCTCATTCACTCTATGGCCTCCCACACAACGCACTCGTGACGCCGTCATAAACCGTTTGATCGAAACACTTTCCACTTCCTCAGTCCTCTCCAAACGCTACGGCACAATGTCCGCCGATGAATCCTCCGCCGCCGCACGCCAGATCGAGGACGAAGCCTTCTCCGTTGCCGATGCTTTCTCTTCTTCTGACAATGACAGCCTTAAGATTCTTGAGATTCCGTCGCCATTTCCGACTCTTGATTTGGTTGAACGAATTGGAGGATTCAGAGGATGTAGAGTTACTCTGAGTATTCAATTTTTGTGA 396 0.5076 MSDPETKPDQESSLAPPSSTVASPPQPNFNASFTLWPPTQRTRDAVINRLIETLSTSSVLSKRYGTMSADESSAAARQIEDEAFSVADAFSSSDNDSLKILEIPSPFPTLDLVERIGGFRGCRVTLSIQFL 131
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00378 131 Pfam WPP domain 32 103 IPR025265 -
Trre1g00378 131 PANTHER WPP DOMAIN-CONTAINING PROTEIN 1-RELATED 6 103 IPR044692 GO:0000278|GO:0048527
Trre1g00378 131 MobiDBLite consensus disorder prediction 1 36 - -
Trre1g00378 131 MobiDBLite consensus disorder prediction 7 36 - -
Trre1g00378 131 Gene3D WPP domain 32 106 IPR038214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00378 Trre-Chr1 2700604 2701192 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g00378 1 2700604 2701192 Trre1g00378 1 2700604 2701192 ECH
Trre1g00378 1 2700604 2701192 Trre5g04892 5 50728848 50729342 PCT