Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00371 ATGGAATATTTAGGTATTGATTTGAGCTGTGCAATTGGATCTCTTCGCAATGGAAACTTCCCTGACAAAGATTGCTTGCTCCCTCTCATTTCAAAACTCCTCGGTTACGCCATCGTCGCCGCTTCCACCACCGTCAAACTCCCTCAGATTTTGAAAATTCTCCAGCATCAAAGTGTGAGAGGACTTAGTATGTTATCGTTTGAGCTTGAAGTTGTTGGGTATACTATATCACTGGCTTACTGTCTTCACAAAGGCCTTCCTTTTTCAGCTTACGGAGAATTGTTGTTTCTTTTGATTCAAGCTTTTGTATTGGTTGCCATAATCTACTACTTTTCCCGACCTCTGAGTACATTCACATGGATTCGGCCATTGATATATTGTGCCGTAGCACCCACAGTCCTAGCTGGTCAAATTGATCCTGTCCTCTTTGAGGCCTTGTATGCATCCCAGCATGCAATATTCCTGTTTGCAAGGATCCCACAAATATGGCAAAACTTTTCTAATAAAAGTACAGGGGAGCTCAGCTTCTTAACTTCTTTTATGAACTTTGGTGGTTCAATGGTTAGAGTGTTCACCACAATTCAAGAAAATGCCCCAAGAAGCGTTCTACTGGGCTATGCAATTGGTGTTGCGACAAATTTTACCATCTTGAGTCAGATACTTATGTACCAAAAGCCCCAGGCTGCGAAAGAGAAGAAAGTGAAATAA 708 0.4181 MEYLGIDLSCAIGSLRNGNFPDKDCLLPLISKLLGYAIVAASTTVKLPQILKILQHQSVRGLSMLSFELEVVGYTISLAYCLHKGLPFSAYGELLFLLIQAFVLVAIIYYFSRPLSTFTWIRPLIYCAVAPTVLAGQIDPVLFEALYASQHAIFLFARIPQIWQNFSNKSTGELSFLTSFMNFGGSMVRVFTTIQENAPRSVLLGYAIGVATNFTILSQILMYQKPQAAKEKKVK 235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00371 235 PIRSF Mpdu1 6 235 IPR016817 -
Trre1g00371 235 SMART ctns 44 75 IPR006603 -
Trre1g00371 235 SMART ctns 156 187 IPR006603 -
Trre1g00371 235 Gene3D - 29 112 - -
Trre1g00371 235 PANTHER MANNOSE-P-DOLICHOL UTILIZATION DEFECT 1 LEC35 -RELATED 6 233 IPR016817 -
Trre1g00371 235 Pfam PQ loop repeat 30 89 IPR006603 -
Trre1g00371 235 Pfam PQ loop repeat 151 199 IPR006603 -
Trre1g00371 235 Gene3D - 150 234 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00371 Trre-Chr1 2635885 2640846 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g00371 1 223 Miscellaneous Gene Families AT4G07390 78.924 2.36e-134 375
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g00371 1 2635885 2640846 Trre1g00371 1 2635885 2640846 ECH