Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00368 ATGATGAATAGCATCTTTGCAAAACTATTGTTCACAACTTTGTGCATGGTCTTTGTGCTCAAAGCCGAATCTTTAGTATTTGCAGACCAAAGATTAAGTATAGTGTATCCTGTGATTCAAAAATTCAAGTCTTTGATTACTTCAGATCCATTAGGTGTTACAAAAACATGGATAGGTTCTGATATATGCAACTATAAAGGATTCTACTGTGATCATCCACCAGATAACAATTCTGCTATTGCTTTAGCCTCGATCGATTTCAATGGTTTTCATCTAAGTGCTCCTACCCTTAATGGTTTTATTGATAAACTACCTGATATTGCACTTTTTCATGCAAATTCCAACAATTTTGTTGGCACAATCACTTCTCAAATCACTAAACTTCCTTATCTTTATGAGCTTGATTTAAGCAATAATCAATTTTCAGGTGCTTTTCCAATTGCTGTTCTTGGTATGAAAAGTTTAACATTTTTGGATATAAGGTTCAACTTTTTCTCTGGTGGTGTTCCACAACAAATATTCACACAAAACCTTGAAGTTCTTTTCATCAATAACAATCTCTTGACACAAACTTTGCCAGAAAATTTAGGCATAAGTTCAAGTACTCATATTTTCTTACTCACTTTAGCTAACAACAAATTTATGGGACCAATACCAAGAGATCTTCCGATAGCTTTATCGAGTTTATCCGAGGTTGTTTTACTAAACAATGAGTTAACAGGTTGTTTACCTCATGAAATTGGTTATTTTCAAGAAGCTATAGTATTTGATGTTGGAAATAATCAACTTACTGGTCCTATACCATTTTCACTTAGTTGTCTTGAGAAAGTTGAGGTTGTTAATTTGGCTAGTAACATGTTTTATGGAATGGTTCCTGAAGTTGTGTGTGCTGAGTTGGTGAATTTGGTGAATTTTTCTTTGTCTGATAACTATTTTACTCATGTGGGACCATTTTGTAGGATGTTGATACAAAGAGGTGTTCTTGATGTTGGAAAAAATTGTATTCATGATCTTCCTTTTCAAAGATCAATGGAAGAGTGTGCTCATTTCTATGCACAACCAAGGATGTGTCCTTTTATGTGGTTTCATAGTTTTATTCTTCCTTGTAAGTTTCCATTTCAAAAATCTTCTGTTTCTTCTATTCCTTAA 1149 0.3333 MMNSIFAKLLFTTLCMVFVLKAESLVFADQRLSIVYPVIQKFKSLITSDPLGVTKTWIGSDICNYKGFYCDHPPDNNSAIALASIDFNGFHLSAPTLNGFIDKLPDIALFHANSNNFVGTITSQITKLPYLYELDLSNNQFSGAFPIAVLGMKSLTFLDIRFNFFSGGVPQQIFTQNLEVLFINNNLLTQTLPENLGISSSTHIFLLTLANNKFMGPIPRDLPIALSSLSEVVLLNNELTGCLPHEIGYFQEAIVFDVGNNQLTGPIPFSLSCLEKVEVVNLASNMFYGMVPEVVCAELVNLVNFSLSDNYFTHVGPFCRMLIQRGVLDVGKNCIHDLPFQRSMEECAHFYAQPRMCPFMWFHSFILPCKFPFQKSSVSSIP 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00368 382 Gene3D Ribonuclease Inhibitor 202 350 IPR032675 -
Trre1g00368 382 SUPERFAMILY L domain-like 38 336 - -
Trre1g00368 382 Gene3D Ribonuclease Inhibitor 37 201 IPR032675 -
Trre1g00368 382 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 23 360 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00368 Trre-Chr1 2596275 2597423 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g00368 24 354 Leucine-rich Repeat extension Gene Families AT3G24480 41.994 7.83e-83 259
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre1g00368 - - tpra:123897584 748.429
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g00368 1 2596275 2597423 Trre1g00368 1 2596275 2597423 ECH