Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00362 ATGACTCAGTGGCTACATATACATATTGCTGTAGTAGCAGCCTCAATTGGATGTTTTTCAACTCTTTTGTTTGTTTTCATTTGGAGGTTATGTAATCAAAAGAAAGATGAAAAGAAATTTGTTGAATCAAATAGTTTGACAAGAATAGAGAGCCATGAAAGGAGGAGGAAAAAAGGAAATTTTTATGGAAGAAAAGATTTGTTCAGCTGGATTGATCATCCATATTTAGCTTCTGATGCTGTAGAAAATGGATGGTCAAGATTTGCTTTTGCAATCTACAATAGTAATATGTTATCAAAAAAATCAACTTCATCAACCCTTTTAGGAGCATGTGTTAGTGGTGAATATGGAACAGAAAATGAGGTTGAGATAAGTTGGGAAGTGTGTCAAGGATCAAATGAATTCATGCAGAAGATAAGACTTAATCCTGGTTTGAAAATGTGTCTAAACAGCATTTCTTCTACAAGCGTTGCTTCTGTTATTAGGACTTCTCTGCCTCTTCCTGGTCCTTCTTTAGGGAACCATGCATTTCCACAAGAAGCTTATTTTGAAATCACTATATTGTATTCTTGTGGTGGAGATGATCATGAATTGGTAGGAAGAAAAGAAGGGGAGAAAACAAAACTACTTATTGAAGATTGTTCAAATGATGAAAGTGATTTGAGAAGTGTTGAAGAAATGAAAGTTGAAGGAAAAGAAGGAGGGAAAAGTGGATCTGTGATGTTGTCATTGGGTTTAACTGCTGGAGAAGGTGTTCCTTTAAGAGTTCCAGGAACTTACCCTAGAAGCATAGGGTTCAACTCCAATGGTTCTGTCTTTCTTGATGGAATGAAACTTGTATTTGAGTCAGACAAAGCACAATGGGTAGGAACTGATACAGTAATTGGTTGTGGATATGATCCAAGGAAAAAGAAAGTTTTCTTCACATTAGACTCAGAATTGGTGCATGTAATTCACTGTCAAACAGAAGAATTCAGCACTCCACTGTATCCAACTTTGACTGCAAATATAGACGTTATGGTTTTAGTTAATTTTGGACAAATTGCATTCAAATATGCTCCTGCAAATGCACAAAGAACACCAAATCCATGCTTCATAGCACCACTTGTACATTCCCCTGGTGCTACCCTTGGCTTTGATGACAGTAAGGAACTATTTTCCATGGGAAGGATTGATTCGCCGTGGCAAAATCGATCTGCAACAAAAGGAAATAACAACAATGGGAATAATAACAATCTAGCTTTTGATTTTGATGAGGAGTCTGAAGCTGATTTATTTGAAATTGTGTTGGATGGTTCAGAAAAATCACCATACTCAGTGTCATTATCATAG 1332 0.3626 MTQWLHIHIAVVAASIGCFSTLLFVFIWRLCNQKKDEKKFVESNSLTRIESHERRRKKGNFYGRKDLFSWIDHPYLASDAVENGWSRFAFAIYNSNMLSKKSTSSTLLGACVSGEYGTENEVEISWEVCQGSNEFMQKIRLNPGLKMCLNSISSTSVASVIRTSLPLPGPSLGNHAFPQEAYFEITILYSCGGDDHELVGRKEGEKTKLLIEDCSNDESDLRSVEEMKVEGKEGGKSGSVMLSLGLTAGEGVPLRVPGTYPRSIGFNSNGSVFLDGMKLVFESDKAQWVGTDTVIGCGYDPRKKKVFFTLDSELVHVIHCQTEEFSTPLYPTLTANIDVMVLVNFGQIAFKYAPANAQRTPNPCFIAPLVHSPGATLGFDDSKELFSMGRIDSPWQNRSATKGNNNNGNNNNLAFDFDEESEADLFEIVLDGSEKSPYSVSLS 443
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00362 443 Gene3D - 148 360 IPR043136 -
Trre1g00362 443 PANTHER IMMUNOGLOBULIN SUPERFAMILY MEMBER 5 65 430 IPR043364 GO:0098609
Trre1g00362 443 CDD SPRY_RanBP_like 226 346 IPR044736 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00362 Trre-Chr1 2545792 2547676 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g00362 1 2545792 2547676 Trre1g00362 1 2545792 2547676 ECH
Trre1g00362 1 2545792 2547676 Trre5g04852 5 50382147 50384418 PCT