Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00358 ATGTATTCTCTGTGCCTCCAAAACGCAACTCTCCACTTTCCCTCCAACCTAACTTCTTCTCTTCTTTTCCCAATCAATAATCACAAATTCTCCTCAAAAGCCCGTTTCCAATGCTCCATCAAAACCAACAACACAAACACCAAACAAGTCACTAACCAAAAGGTTCTAATCCTATGGGACCTCGACAACAAACCTCCACGTGGACCTCCATACAACGCCGCACTCTCTCTCAAAACCCTAGCCGAACGCTTCGGCGACGTCGTTTCAATCTCCGCATACACAATACGACACTCCTTCTTCAATCACCCTCAGTGGCAACCCGACCAAAACCCTAAACCTAATTCCAAAATCTGCCGTGTATGCGGCCACCAATGCAAATCGATTTTCCATCTTAAAATTCACTTCAAGCAAATTCATGAGAATCAGTATAAGAAGTGGCTGGAACGATTGAAATCAATTAAATTGGATCGCTCGAAGGTTCGGTTTATTCGTAGGAGGCATATTCATAATGAGGCTGCGAGGACTACTGCTGCGCCTAGGGTTGGATTTGGTTTAGCTTCGGAGTTGCGGCGTGCTGGTGTTTTTGTGAAGACTGTGGAACTTGGTGATAAGGTGAATGCTGCTGATTCGTCGTTGAAGAGGGAGATTATGAGTGGAGGGGTTGATTGGTTGATTTTGGTTTCGGATGATTCGGAGTATTCGGAGATGTTGAGGGAGGTGAGGGAGATGAAATTAGGGAATGTTGTTGTTGTTGGAGATTATTGGGATAGGGATTTGGGGAGGAATGCTGATTTGTGGCTTCCTTGGATTGTTGTTGAGAATGGAAAGGTTGAGAAAATGGATTTAATGAGAAGAAGAACATTAACAGAGGATTTGGATGATGAATTGGAAGAAGATGTGAATGTGGATGATGAGTATACAATAGAAGAAGAACAAGAAGAAGATGGGTTTTATGTTTATTAA 963 0.4299 MYSLCLQNATLHFPSNLTSSLLFPINNHKFSSKARFQCSIKTNNTNTKQVTNQKVLILWDLDNKPPRGPPYNAALSLKTLAERFGDVVSISAYTIRHSFFNHPQWQPDQNPKPNSKICRVCGHQCKSIFHLKIHFKQIHENQYKKWLERLKSIKLDRSKVRFIRRRHIHNEAARTTAAPRVGFGLASELRRAGVFVKTVELGDKVNAADSSLKREIMSGGVDWLILVSDDSEYSEMLREVREMKLGNVVVVGDYWDRDLGRNADLWLPWIVVENGKVEKMDLMRRRTLTEDLDDELEEDVNVDDEYTIEEEQEEDGFYVY 320
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00358 320 PANTHER C2H2-TYPE DOMAIN-CONTAINING PROTEIN 35 313 - -
Trre1g00358 320 ProSitePatterns Zinc finger C2H2 type domain signature. 118 139 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00358 Trre-Chr1 2533800 2534762 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g00358 53 317 C2H2 Transcription Factor Family AT5G52010 45.051 3.56e-74 232
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g00358 1 2533800 2534762 Trre1g00358 1 2533800 2534762 ECH