Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00345 ATGGGTACCGAACAACCAAATGGAGATTATCTATTGTTGAATTCACATGAAGCAAGTGTTGTTGATTTAGTGAGCCTCTTGTTTTCATCAAATTTATCAAATAGAAGATTCATTGATTGTCCACAAGGACTTGAGGCAAGACTATTTCGACAAAGATGGCTTCTCTTTACTTCTGTTGTTGCACAAAAGATTCTTGTTGCTATAGATCCCTTTTTGAAAATGTTTGGAGACATGTTGGAATTGTTTCTCAATCGTTTATCAAGTAATGGAGGGTTTCTTAAGCTCTTCTTCAACTTTCTTAAAGGAAAGATGATAACACCGGAAAGGTCATCGGCGGAGTACTTATCGGTGTTGGGCCATCTTGACACAAGAGTTGATTTAGACAAAACTATTCATCATAAGGATGCTAAGTACAAAGCTTTACTATCTATCATGGCTTCTAAATTTTCCTATGAGAATGAACAATTCATTAGTAACGCAGTTACAAATCATTGGGGTATGGAATTTTTGGGGCTATACAGCTTTTGGAACGATTACCAGAAGCACGCGTCCACAAAAGCCATGATAGTGCAAGATACAAAATCTGAACCCAGCTTGATTGTAGTTGCATTTAGAGGCACAACTCCATTTGATGCTGAGCAGTGGAAAACAGACGTGGATATCTCATGGTATGACCTACCAAACGTGGGTAAGGTACACGGTGGGTTCATGAAAGCATTGGGCCTTCATGAGAACGGTGGATGGCCCAAAGAAATAGATGAAAGTGGCAAACATCATTATGCTTACTACACAATTAGAGAAGAGCTGAGAGCAATGTTGAGGGAAAATGAGGATGCAAAATTCATTTTGACAGGGCACAGTTTAGGAGGAGCATTGGCTATTCTGTTTGTATCAATGCTTATATTCCATGAGGAAGAAGTGTTGTTGGATAAGTTAGAAGGTGTTTATACATTTGGGCAACCAAGAGTAGGAGATGAAATGTTTGGGGAATTCATGAAAAGCAAGTTGAAAAGGTATGATGTGAGGTATTTGAGATATGTTTACAGTAATGATATGGTTCCTAGGATCCCTTATGATGACAAATCCCTCTTCTTTAAGCACTTCAGTCCTTGCCTCTATTTCAACAGCCTTTACCAAGGACAGATTCTAGAGGAGGAGCCAAACAAGAATTATTTTTCTGTGTTCTGGGTGATACCTAAGATCTTAAATGCAGTTTGGGAGGTGATTAGAGGCTTCCTTCTACCTTTAATTGCAGGTAGAGAGTATAAACAAAATTTGTTCATGACGTTGTTCAGGCTAGTTGGATTGATAATTCCAGGACTACCTGCTCATTCCCCTGCCGATTACATCAATGCTGCCCGTTTGGGTTCGCTAAATGAAAATCTAGAGCTTCCAAATTCTAAAGATGACTAA 1413 0.3892 MGTEQPNGDYLLLNSHEASVVDLVSLLFSSNLSNRRFIDCPQGLEARLFRQRWLLFTSVVAQKILVAIDPFLKMFGDMLELFLNRLSSNGGFLKLFFNFLKGKMITPERSSAEYLSVLGHLDTRVDLDKTIHHKDAKYKALLSIMASKFSYENEQFISNAVTNHWGMEFLGLYSFWNDYQKHASTKAMIVQDTKSEPSLIVVAFRGTTPFDAEQWKTDVDISWYDLPNVGKVHGGFMKALGLHENGGWPKEIDESGKHHYAYYTIREELRAMLRENEDAKFILTGHSLGGALAILFVSMLIFHEEEVLLDKLEGVYTFGQPRVGDEMFGEFMKSKLKRYDVRYLRYVYSNDMVPRIPYDDKSLFFKHFSPCLYFNSLYQGQILEEEPNKNYFSVFWVIPKILNAVWEVIRGFLLPLIAGREYKQNLFMTLFRLVGLIIPGLPAHSPADYINAARLGSLNENLELPNSKDD 470
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00345 470 SUPERFAMILY alpha/beta-Hydrolases 141 392 IPR029058 -
Trre1g00345 470 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 8 463 IPR044819 GO:0004806|GO:0006629
Trre1g00345 470 CDD Lipase_3 137 375 - -
Trre1g00345 470 Gene3D alpha/beta hydrolase 128 398 IPR029058 -
Trre1g00345 470 Pfam Lipase (class 3) 201 360 IPR002921 GO:0006629
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00345 Trre-Chr1 2443005 2447237 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g00345 5 469 Acyl Lipid Metabolism Gene Families AT1G56630 52.795 0.0 518
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g00345 1 2443005 2447237 Trre1g00345 1 2443005 2447237 ECH