Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00344 ATGCGGGATTTAGGGTTTCAAGAACAACGACGTTCGTGGAGGCGTAACACCGGTTCAACAAGACGTAACGCCGCCGCTGCCTCCGCCGGCGATACAAGTCCCGACTCTGTCATTTTCACTCTCGAATCTAACTTGAGTCTCTTCTCCTCTGCTTCCGCTAGCGTCGATCGCTGTTCTTTCGCTTCCGATGCTCACGACCGCGACTCTTTAAACTCCGAAATCTCACTGCATTTGGCAGGTCACGGTGGTGATTTTGCTCCGAGCGAAAGCTGGAGCGGTCCAGATCCGGATCCGGATCCGTGTAGACAACAACATGCAGATTCAGTTTCAGTTCATAAAAAGAAGATTCGCGAAACTATTTTCTCTGGAAAAGGAGAAAAAACAAAAGTTCAAAAGGAAGACAGTGACGTTGACACTGAAGAAGACGGAAATCAACTTGTGGAATTTGATTCTGCCAGAAACTCTTTCTCTTTAGCTCTTAAAGAATGTCAAGATCGGAGATCGAGATGTGAAGCTTTATTCAAGAAGCAAGATCGGAGAAGACCTGCTTCATTAGATCTGAACAATGCTAATGCTAATGCAATTGGAACTGTTTCTGTTTCGCCTCGTTTGGGAGTTGGAGCTATGAAGAAGAATACGGTTGCGTCTCGGAGATCTGGCTCTGGTACTGGAACTGGAACTTTTCCGAGTCCTGGTACTCCGAATTATCGTCATTGTCAGGGTGGTGTTGCAATGCAAAAGGGTTGGAGTTCTGAGAGAGTTCCTTCGCATACGAGTGGGGCTCGCAAGCAAGTTGGTAATGGTGCGGGTACATTGTGCTTAAGTAATGGGAGAACGCTGCCGTCTAAGTGGGAAGATGCTGAGAGATGGATTTTGAGTCCTGTTTCGGGTGATGCAGCTGGGAGGGCCTCGGTTCCACAGCCACTGAGGAGGCCTAAGTCGAAGAGTGGTCCACTTGGCCCGCCTGGTGTTGCGTATTATTCGCTGTATTCACCTGCAGGTCACTTTTTTGATGGAGGGAATTTTTTAACAGCTTCACCTTTTTCTGCTGCTGTTAATGCTTCTGCTGAGGGGTTTACAAATAGTTCTGGCGGTAATGGTGGTGGAACGCTTCCCACACGAACGGATCCTTGCATGGCTCGCTCAGTCAGTGTACATGGTTGTTCTCAGACGCAGGGTCAATCGTCAATTCCCACCCGAGAGGAGAAGTTTGATGCTTTTAAGGATGCGGGTACCAATGTATCCCCTGCTGTTTCAAGAAGAGACATGGCAACCCAAATGAGCCCAGAGGGAAGCTCATGCTCCTCTCCCAATATGAGAACTTCTTTCTCTGCTTCCACTCCACCACCCCTGCCTGTCACAGAGTTGCAGAGTGCCTCTTTTGCTAAAATGGATATCAGGGATGTGCAGGTAGATGAACGCGTAACCATGACAAGGTGGTCAAAGAAACACAGAGCCCTATTCACTGGTAGAGGTTCAGAAAATGTTGACAGCTGGAAAAAGAAAGAAACAAGCACTCGATCTTCATCTTGGGAAATTTCTGAAAGCTCGAAGACTGTTTCAAAGGCTAAAAGGGAGGAAGCCAAAATCACTGCATGGGAGAACTTGCAAAAGGCAAAAGCTGAGGCTGCAATACGGAAACTAGAGATGAAGTTGGAAAAGAAGCGAGCATCTTCCATGGACAAGATTATGAACAAACTGAGATTTGCTCAGAAAAAGGCTCAGGATATGAGAAGTTCAGTTTCAGCCAACCAGGCTCATCAAATTGCCAGAACTTCTCAAAAGGTTATGTCATTTCGGAGAGCCAGCCAGATGGGTTCTTTGAGTGGCTGTTTCACCTGTCATACCTTTTAA 1854 0.4714 MRDLGFQEQRRSWRRNTGSTRRNAAAASAGDTSPDSVIFTLESNLSLFSSASASVDRCSFASDAHDRDSLNSEISLHLAGHGGDFAPSESWSGPDPDPDPCRQQHADSVSVHKKKIRETIFSGKGEKTKVQKEDSDVDTEEDGNQLVEFDSARNSFSLALKECQDRRSRCEALFKKQDRRRPASLDLNNANANAIGTVSVSPRLGVGAMKKNTVASRRSGSGTGTGTFPSPGTPNYRHCQGGVAMQKGWSSERVPSHTSGARKQVGNGAGTLCLSNGRTLPSKWEDAERWILSPVSGDAAGRASVPQPLRRPKSKSGPLGPPGVAYYSLYSPAGHFFDGGNFLTASPFSAAVNASAEGFTNSSGGNGGGTLPTRTDPCMARSVSVHGCSQTQGQSSIPTREEKFDAFKDAGTNVSPAVSRRDMATQMSPEGSSCSSPNMRTSFSASTPPPLPVTELQSASFAKMDIRDVQVDERVTMTRWSKKHRALFTGRGSENVDSWKKKETSTRSSSWEISESSKTVSKAKREEAKITAWENLQKAKAEAAIRKLEMKLEKKRASSMDKIMNKLRFAQKKAQDMRSSVSANQAHQIARTSQKVMSFRRASQMGSLSGCFTCHTF 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00344 617 MobiDBLite consensus disorder prediction 18 35 - -
Trre1g00344 617 Coils Coil 538 558 - -
Trre1g00344 617 Coils Coil 560 580 - -
Trre1g00344 617 MobiDBLite consensus disorder prediction 213 235 - -
Trre1g00344 617 MobiDBLite consensus disorder prediction 252 272 - -
Trre1g00344 617 MobiDBLite consensus disorder prediction 214 234 - -
Trre1g00344 617 MobiDBLite consensus disorder prediction 420 451 - -
Trre1g00344 617 PANTHER OS02G0116800 PROTEIN 257 612 - -
Trre1g00344 617 MobiDBLite consensus disorder prediction 81 109 - -
Trre1g00344 617 Pfam Remorin, C-terminal region 503 605 IPR005516 -
Trre1g00344 617 MobiDBLite consensus disorder prediction 1 35 - -
Trre1g00344 617 MobiDBLite consensus disorder prediction 297 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00344 Trre-Chr1 2438205 2442014 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g00344 1 2438205 2442014 Trre1g00344 1 2438205 2442014 ECH