Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00343 ATGGTGATCGCCGACTCCGACTATGAAGGCGCCGCTATCCAATCCCTCGGTTCTCTCTTCAATGTTACCCAAGTCTTTCTCTGGGATGACGGCGTCCCAGTTCAACCATCGTCTGAAGCTCATCACAACCATCACAAATCAAATCCCATTCCTGATTGGAGTGAAATTGTTATTCTGCCAGAGGATTTGGAATTGAACAAACAAATGAATGAATTGGGTCTCCCTCTCTCATTTCAGACAAATAAGAAGGAGAAATGCGGACCAGTAAAAGGCAAAAAGAAGGGTGCACGTTCCAAGCTGCCACGTACTTGTAACAATCCTGGTGATGAAACTCTAAATGAAGTGAGTGCAGAGGAGGTCATATCTCCTGCTAAATTTCATAATAAAACTAACAGCTCATTATCTTGTATATCAATGCTGGGCCAAAGTGAACCGTCCTTCTGTGATGGTGCAGTGGAAGTTGACACGGCCCGATCTGTCTCTGGTGAAGGCGATAATTCAACAGTTTGCACTGGGTTTGCTGATGGTGTGTTCGTGGAGAAAATTAATAGTATGAATAATGCAGAAACTAATGATGCCAATAATAGTGACTTTGATTTCAAAAGGGTACATGCCTCGGAAACTGGAGTCTCTGCTGGAAGCCACTTGACAGATTGTGAGACTATTTGCAATGACGATGGTGCTGCCACTTGGAATCCATCAGCTAATGAATCAGAATCACTTTCCATGAGTTTGGAAGAGATTGGATGTGACAGAGTTGATGGGTCAAATGATTGCGGTGAATTTAGAGATTGGATGGTGTTATGGGATACTTTCTATGGGAGAAGATACTTCTACAATGTTAAAACAGACACTTCTACATGGGACCCACCCCCAGGGATGGAGCATCTAGCATTTGGCGGGTTTACTGAATTAGATGATAGTGAAGCTTTAAAGTCGTCTGAGGAGTGTGAAACACAAAGGAGCATTAAAGCACTTGAAGAAACCTTGGTAGACGAGAACTTATCTGGAAATCAACATGAAGAATATTCAGCTGAGATTGGAGTCGCTGCTGGAAATTTGGTCTCTGATATTGTTACAAATAATGAAGACCAATCTCTTCATCATTCAGATGAGAATCTTGAAAGCGGTGGAGTTTCATGCTGCTCTGTATCAAATACCCCGGATCATTTTGTTAGCACTAACGATAGGTGCAGTCAAGCAACATCAGAGGTCAATCATACACCAATGGAAAACATGGTCATTGATGCGCCTGGATTGGATAGTAAATCTGATAATTTCATGTCAAAACAGAAAAAGAAAGTGAAAAGAAAACACAGGCGGAAGAAATTATATTATGAAACTGAAGAGCTCGAATTTCAAAAAATGCCCGATGCTTATTCTGCAACAATTGAAAAGTATTGGTGTCAGAGGTATATTTTATTCTCTAGATTTGATGATGGTGTAAATATGGATGAGGAAGGATGGTTTTCTGTCACTCCAGAGGTTATTGCTCATCATCAAGCTTCACGCTGTGCAAGCGGCACGGTAATTGACTGTTTCACCGGTGTTGGCGGGAATGCTATCCAATTCGCACAACGGTGCAATCATGTGATTGCAATTGATATTGATCCTTTGAAGATTGGTTTTGCTAGGCATAATGCTGCAATATATAGAGTGGATGATCTAATTGATTTCATAATTGGTGACTTCTTCGTCTTGGCACCAAAGTTAAAGGCTGATACTGTTTTCTTATCTCCACCTTGGGGTGGACCTGATTATGCGAAGGTTGAGACTTATGATATGAAGACAATGCTTAGACCACATGATGGATATACTCTGTTCAATGCTGCTAAGGAAATTGCTTCAAGAGTTGTCATGTTCCTTCCAAGAAATGTCAATTTCAACCAATTGGCAGAGTTATCTCTATCTGCCTGTCCACCGTGGTCGCTAGAGGTGGAGAAAGTTCATTTAAATGGAAAATTGAAAGCAGTCACAGCTTATTTCAGTCGTACACCAGTTGGAGAGTGCTGA 2013 0.4133 MVIADSDYEGAAIQSLGSLFNVTQVFLWDDGVPVQPSSEAHHNHHKSNPIPDWSEIVILPEDLELNKQMNELGLPLSFQTNKKEKCGPVKGKKKGARSKLPRTCNNPGDETLNEVSAEEVISPAKFHNKTNSSLSCISMLGQSEPSFCDGAVEVDTARSVSGEGDNSTVCTGFADGVFVEKINSMNNAETNDANNSDFDFKRVHASETGVSAGSHLTDCETICNDDGAATWNPSANESESLSMSLEEIGCDRVDGSNDCGEFRDWMVLWDTFYGRRYFYNVKTDTSTWDPPPGMEHLAFGGFTELDDSEALKSSEECETQRSIKALEETLVDENLSGNQHEEYSAEIGVAAGNLVSDIVTNNEDQSLHHSDENLESGGVSCCSVSNTPDHFVSTNDRCSQATSEVNHTPMENMVIDAPGLDSKSDNFMSKQKKKVKRKHRRKKLYYETEELEFQKMPDAYSATIEKYWCQRYILFSRFDDGVNMDEEGWFSVTPEVIAHHQASRCASGTVIDCFTGVGGNAIQFAQRCNHVIAIDIDPLKIGFARHNAAIYRVDDLIDFIIGDFFVLAPKLKADTVFLSPPWGGPDYAKVETYDMKTMLRPHDGYTLFNAAKEIASRVVMFLPRNVNFNQLAELSLSACPPWSLEVEKVHLNGKLKAVTAYFSRTPVGEC 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00343 670 ProSiteProfiles WW/rsp5/WWP domain profile. 265 293 IPR001202 GO:0005515
Trre1g00343 670 Gene3D - 256 317 - -
Trre1g00343 670 CDD WW 264 293 IPR001202 GO:0005515
Trre1g00343 670 FunFam S-adenosyl-L-methionine-dependent methyltransferase superfamily protein 459 666 - -
Trre1g00343 670 SUPERFAMILY WW domain 263 292 IPR036020 GO:0005515
Trre1g00343 670 PANTHER S-ADENOSYLMETHIONINE-DEPENDENT METHYLTRANSFERASE RELATED 60 664 - -
Trre1g00343 670 SMART ww_5 260 293 IPR001202 GO:0005515
Trre1g00343 670 MobiDBLite consensus disorder prediction 85 110 - -
Trre1g00343 670 Pfam WW domain 264 291 IPR001202 GO:0005515
Trre1g00343 670 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 470 628 IPR029063 -
Trre1g00343 670 ProSitePatterns WW/rsp5/WWP domain signature. 265 291 IPR001202 GO:0005515
Trre1g00343 670 Pfam RNA cap guanine-N2 methyltransferase 509 664 IPR019012 GO:0001510|GO:0008168|GO:0009452
Trre1g00343 670 Gene3D Vaccinia Virus protein VP39 458 667 IPR029063 -
Trre1g00343 670 CDD AdoMet_MTases 509 590 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00343 Trre-Chr1 2426253 2434265 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g00343 1 2426253 2434265 Trre1g00343 1 2426253 2434265 ECH