Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00308 ATGAACAACAATGACAATTGGGAGGAGGATGAAGAAGAAGAAGAAGACGAGGAGGACATGGAATTCTCGAGAAATTATTTTCTAGCAAAGGAATTGACATCTTCGGTAAAGAAATCTAAACACAAGATCACCGATATCGATGTTGTTGATGAACAGGAATTGAGAGAAGCTTCGTTGCAAATTCAACCCAAGCATGAAAACGAGATTGCCGTTATAATCGATTCCTATACATCTATGTATGCTGAATGGCTTCTCTCCCTAAGATGTGGGTTTGCTCTTCTAATGTATGGCTTTGGGTCTAAGAAGGCTTTGATCGAAGACTTTGCTTCGAAGACATTGACCGAATATTCTGTAGTTGTCATTAATGGGTATCTTCAGGCCATTAACTTAAAACAGGTTCTAATAGCTTTAGCTGAACTTCTATGTGACCAAGTGAAAGCTAAACGTAAGGTTTCCGGCCGGCAGCCATTCAATACTCAATCTATGGAAGATCTTCTTACATTTTTGTATGAAGCGGAAGTAGAGGACAATGATTCTTTTGTCTGTGTAGTCATTCACAATATTGATGGACCAGGATTAAGGGACTCTGAAACCCAACAATATCTGGCTCGACTGGCTTCTTGTACCCATATTCGCATCGTTGCCTCTATTGACCATGTTAATGCTCCCCTGTTTTGGGACAAGAATATGGCTCACACACAGTTCAATTGGTGCTGGTACCATGTTCCTACATTTGCCCCATATAAGGTTGAAGGCATGTTTTATCCTCTGATTCTTGCACACGGCAGTGCCAGCCAAAGCGTCAAAACAGCTGCAATAGTTTTGCAAAGTTTGACACCCAATGCCCAGAGTGTATTCAAAGTTCTTGCTGAATATCAAATTTCTCATCCCGATGAAGGAATGCCAATTAGTGATCTATACTCAGTCTGTCGTGAACGTTTCCTTGTTAGCAACCAGGTTACCCTGAATTCTCATTTGACGGAATTTAAAGACCACGAGCTGGTCAAGACCAAGAGGCATTCCGAAGGTCAAGATTGCTTGCACATACCTCTGACAACAGAAGCACTTCAAAAAGTTCTACTCGAGATCAGTTAG 1095 0.4128 MNNNDNWEEDEEEEEDEEDMEFSRNYFLAKELTSSVKKSKHKITDIDVVDEQELREASLQIQPKHENEIAVIIDSYTSMYAEWLLSLRCGFALLMYGFGSKKALIEDFASKTLTEYSVVVINGYLQAINLKQVLIALAELLCDQVKAKRKVSGRQPFNTQSMEDLLTFLYEAEVEDNDSFVCVVIHNIDGPGLRDSETQQYLARLASCTHIRIVASIDHVNAPLFWDKNMAHTQFNWCWYHVPTFAPYKVEGMFYPLILAHGSASQSVKTAAIVLQSLTPNAQSVFKVLAEYQISHPDEGMPISDLYSVCRERFLVSNQVTLNSHLTEFKDHELVKTKRHSEGQDCLHIPLTTEALQKVLLEIS 364
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00308 364 MobiDBLite consensus disorder prediction 1 21 - -
Trre1g00308 364 Pfam Origin recognition complex subunit 2 39 354 IPR007220 GO:0000808|GO:0005634|GO:0006260
Trre1g00308 364 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 2 14 362 IPR007220 GO:0000808|GO:0005634|GO:0006260
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00308 Trre-Chr1 2216280 2219498 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g00308 22 364 Core DNA Replication Machinery Family AT2G37560 64.244 3.51e-173 484
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g00308 1 2216280 2219498 Trre1g00308 1 2216280 2219498 ECH