Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00295 ATGCATCGAATTTGTTTTAGAACTCGACCCCTTCTTCGTTTCCCTAATCCTCGAAAATACATTTCTTCATCATCTTCCAATAAAACTCTCAACAATTCACATTCACCCGATAAACCTCTACAAAATCCCCAAATTACCCCTCCAACCGTTCCTAACAAACTCTCTCCTGTTACTTCTTCCTCGTTATTCTCAACACCCTCCGTTATCGCTCTTTCCGCCGCAGTAGTCGGTTCCGTCGCATTAATCTCATACGATTACGGCCGCGAACAACAATCCGATCACGGAGGAGTCCATAATCCTATCTACGTTGGCGCCGAGCACGCCGCCCATCGTTCCGCCGAATCTGTAAACCGGATTTTCCATCATGTGAAACGAACCGGTGTTGCTGCTACGGTGCTATGGCAGTCGTTACGTTCGGTGTTGTCGTCGGCGAACCACGAGGTTCGTTCTGGATTCGAGATTCGTGTGGCGGCGTTGCTAGCGGATATCGCTGCTGCGAATTCAAGTCGAAGAGCCGCGATCGTTGGTGCCGGTGGTGGTGCTGTCGTGGATTGGTTACTTGATTCTGTTGCTGTTGTGAAAGATGTTGGTGGAGGTACTCAGGCGGAAGCGGCGAGAGCGCTGGCGTATTTGATTGCGGATCCTGATGTATCTCCTGCTGTGTTTGCGCGACCTCACGCTGTTCCGAATCTTCTGAGGTTTATCTTCTCTTGCAAGCCACGGCGTTCTAAGAATAAAACGAAGAATTCAAGACGTAGTGCATTTGATGTTTCTGATTCTTTGAAAGGTAGGAGCATGCTTGTGGCTTCTATTATGGATATTGTTACTTCCAGCTGCGACAATGCAGAGAAGGTATTTTTTAAGCCGTCTTTGCCCGGAAATGCTGAAACCAGAGATATTGCTGAAGCACTACAAGTTATTGAGGAGGGGGGTTTGCATTTGGACGAGTCACCCGAGGATGATGATGATGATGGTGGTGGTGGGATAGGAGGGAAAGGGATTGGAATCAAGATACTTGGAGGTACCACTGTTATAGGACTTTCAAGGAACCACGATGGAATGGAGTTGGATAATACTGATTTCGGTCATGAAGAACCGTTGAAGCATGGTACACCGACAACCCTTGTGCACCATAAGTTTGATGATTCCCGGGTAAAACACAATATGTCCTCTGTTGTTGTACCTGGTCTCTGGGATGATTTAAACTATGAACATGTTGCTGTTCCTTTTGCCACCTGGGCATTGGCAAATTGGGCAACGGCATCGCAGTTGAATAGATCTCGTATTCAGGAACTAGATCAGGATGGAAATGCTGTCTTGTCTGCTCTAATGGCACCTGAGAGATCTGTAAAATGGCATGCGAGTTTGGTGGTGCGGTTGCTTTTAGAAGATCGCGATACACCTTTGAATGAATCTGTTTCTGATTGGAGTTCCCATCTTCTTTCTACTATATCTCATGCATGTAAGCATGATGATGCTTCGTTGGCTCGGGTAGCTTTTTCTGCCTTCCTTTTATCTGTTGAGAGGAGTCCTGAGGTGCAGAAGACAGTGATGGAGAAGGGTCTTAATTTGATGAGAGACATTGCCAAGACAACAAAACATAAGCAGGTGCAAGAAGCAATAGCAAAGGCATTAGAACTAATTTGTACCGGGGATCGACATTTATCTCTTGAAGAGAGTCAAAAGTGGTCAGGCATTCTCATTCCCTGGGTTTTTGGAACATTTTCTTCTGATCTTCTACGAAATTCAGCCATAAAAATTCTGTCCCAGATCCTTGAAGACTATGGAACAACATGTGTACCACTTTCCCAAGGATGGTTAGCCATGCTGTTAAATGAAGTACACAATTCCATCAAGAAATCAATTGATAAAGGAGTCAGTCAACCAAAAAGTGATAAAGTGAAGACTTTAATCAATAATGCAAATATTGCTTCTGCTGCACAAGTTGCAAATCAGCTTTCCAGCGCTGTTGTTAATCTGGCAGCTAAACAACTGAGCATTGTGTCTAATTCTGAGGATATATCCCCACTGGCAGATTTTCTTTCTCTGGAACCTTTAGCAGGGCCATTTAAAAATTTAAAAAAGGATAGTCTGCCTAAATTTGGTGCTGCAGATTCTGCCTCGGCAACCCTTAAAGGTATTAAGGCTCTGACTGAAGTTTGTGCAGAAGACTCCGAGTCTCAGGACAAGATTGTTGATTTTGGTATTTTATGTTTGCTGAGGCGCTTTTTGTTGAATGATGATTATGAGAGATTGGCTGCTATTGAAGCTTATGATGCATCATCAAGAGCGCATGATAGGAAATCAAATGAGGGTGAGGAACCACCTAAATCAGATATAAATGATCCATCTAGTGTCCGAGTTCCACCTACAGCTCATATCCGCAGGCATGCAGCTCGGTTGTTGACCATCCTCTCACTGCTTCCCAGAGTTAAGAAGATAATTGTAGCTGATAAAACTTGGTGCAGTTGGCTTGATGATTGTGCTAATGGTAAGATTCCGGGTTGCAGTGACCTTAAGTTGCAAAGTTATGCCAGAGCAGCACTTTTAAATATATTTTGCAATGACCAGATTAATGGAAGGTCTGACAGTGCAAGCCCTTCTGGTGGTAGTGGTGTAAATAATAATAATATGTGTCCCCGTTACGAAGACATGATATTCTTGATAAATTCTCATCTTCCTCACTGGAAATGTCCCAATGAAACTGATCAACAAGGATCTTTCTCAACAGACACAACAGATTCAACAAAAAGCAGCCCGGATGCAGATTTTCCTCAACTAGATGTGGTTTTTGTGCATGGCCTCCGTGGCGGCCCTTACAAAACTTGGCGTATATCAGAGGACAAATCGTCAACTATGTCTACTTTGGTAGAGAAGATTGACGAGGATTCTGGAAAGCTTGGAACCTTTTGGCCAGGTGAATGGCTTTCTGGTGATTTTCCGCACGCTCGCTTGTTTACCCTCAGATACAAGACTAATCTCACACAGTGGTCTGGAGCCAGCCTTCCTCTTCAGGAAGTTAGCTCTATGCTATTGGAGAAGCTTGTTGCTGCAGGAATTGGGAATCGACCTGTTGTTTTTGTTACTCACAGCATGGGGGGCTTGGTCGTGAAGCAGATTCTCCATTCAGCAAAGGAAGAAAGATTTGATAATCTTGTGAATAACACAAGAGGAATAGTGTTTTATAGCTGTCCACATTTTGGCAGCAAACTTGCTGATATGCCTTGGCGAATGGGCCTTGTACTTCGTCCTGCTCCATCGATAGGAGAGCTAAGAAGTGGATCTTCAAGATTGGTTGAGCTTAATGATTATATTCGTCAACTTTATAAGAAAAGCGCTCTTGATGTCCTCAGTTTTTGTGAGACTAAGGTGACTCCAATAGTGGAAGGTTATGGTGGATGGGCCTTTCGAGTGGAAATTGTACCAATTGAGTCAGCATATCCTGGATTTGGGGAACTAGTTGTATTGGAGTCGACCGATCATATAAATTCTTGCAAGCCAGTGAGCCGCTCAGACCCTTCTTATACGGAGACATTAAAGTTCTTAGAGAAATTAAAAGCATTCTATACCTGA 3573 0.4391 MHRICFRTRPLLRFPNPRKYISSSSSNKTLNNSHSPDKPLQNPQITPPTVPNKLSPVTSSSLFSTPSVIALSAAVVGSVALISYDYGREQQSDHGGVHNPIYVGAEHAAHRSAESVNRIFHHVKRTGVAATVLWQSLRSVLSSANHEVRSGFEIRVAALLADIAAANSSRRAAIVGAGGGAVVDWLLDSVAVVKDVGGGTQAEAARALAYLIADPDVSPAVFARPHAVPNLLRFIFSCKPRRSKNKTKNSRRSAFDVSDSLKGRSMLVASIMDIVTSSCDNAEKVFFKPSLPGNAETRDIAEALQVIEEGGLHLDESPEDDDDDGGGGIGGKGIGIKILGGTTVIGLSRNHDGMELDNTDFGHEEPLKHGTPTTLVHHKFDDSRVKHNMSSVVVPGLWDDLNYEHVAVPFATWALANWATASQLNRSRIQELDQDGNAVLSALMAPERSVKWHASLVVRLLLEDRDTPLNESVSDWSSHLLSTISHACKHDDASLARVAFSAFLLSVERSPEVQKTVMEKGLNLMRDIAKTTKHKQVQEAIAKALELICTGDRHLSLEESQKWSGILIPWVFGTFSSDLLRNSAIKILSQILEDYGTTCVPLSQGWLAMLLNEVHNSIKKSIDKGVSQPKSDKVKTLINNANIASAAQVANQLSSAVVNLAAKQLSIVSNSEDISPLADFLSLEPLAGPFKNLKKDSLPKFGAADSASATLKGIKALTEVCAEDSESQDKIVDFGILCLLRRFLLNDDYERLAAIEAYDASSRAHDRKSNEGEEPPKSDINDPSSVRVPPTAHIRRHAARLLTILSLLPRVKKIIVADKTWCSWLDDCANGKIPGCSDLKLQSYARAALLNIFCNDQINGRSDSASPSGGSGVNNNNMCPRYEDMIFLINSHLPHWKCPNETDQQGSFSTDTTDSTKSSPDADFPQLDVVFVHGLRGGPYKTWRISEDKSSTMSTLVEKIDEDSGKLGTFWPGEWLSGDFPHARLFTLRYKTNLTQWSGASLPLQEVSSMLLEKLVAAGIGNRPVVFVTHSMGGLVVKQILHSAKEERFDNLVNNTRGIVFYSCPHFGSKLADMPWRMGLVLRPAPSIGELRSGSSRLVELNDYIRQLYKKSALDVLSFCETKVTPIVEGYGGWAFRVEIVPIESAYPGFGELVVLESTDHINSCKPVSRSDPSYTETLKFLEKLKAFYT 1190
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00295 1190 MobiDBLite consensus disorder prediction 763 789 - -
Trre1g00295 1190 SUPERFAMILY alpha/beta-Hydrolases 928 1171 IPR029058 -
Trre1g00295 1190 MobiDBLite consensus disorder prediction 18 40 - -
Trre1g00295 1190 PANTHER ALPHA/BETA-HYDROLASES SUPERFAMILY PROTEIN 15 1189 - -
Trre1g00295 1190 Gene3D alpha/beta hydrolase 925 1125 IPR029058 -
Trre1g00295 1190 Gene3D - 75 283 IPR011989 -
Trre1g00295 1190 MobiDBLite consensus disorder prediction 900 922 - -
Trre1g00295 1190 MobiDBLite consensus disorder prediction 17 57 - -
Trre1g00295 1190 MobiDBLite consensus disorder prediction 763 780 - -
Trre1g00295 1190 SUPERFAMILY ARM repeat 133 632 IPR016024 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00295 Trre-Chr1 2144362 2150276 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g00295 1 2144362 2150276 Trre1g00295 1 2144362 2150276 ECH