Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00291 ATGGTATCTGATAAGCAATCTGCAGGTCTTCTTGATACACTTAAAATGGAGAGGGTCAGAACTATTCTGACCCACACTTATCCTTACCCTCATGAACATTCCCGCCATGCTATAATTGCTGTTGCCGTGGGTTGCCTTTTTTTCATCTCATCCGACAATATACATACTCTTGTAGAAAAATTAGATAACAATATTAAATGGTGGTCTATGTATGGCTGCTTGTTTGGATTCTTCTATTTCTTTTCATCACCATTTTTGGTTAAGACTATCAAGCCGAGCTATTCAAATTTCAGTCGATGGTACATAGCCTGGATTTTAGTGGCAGCAGTGTACCATCTTCCTAGTTTTCAGTCAATGGGGGTGGATATGAGAATGAATCTATCTTTGTTTTTGACAATATATATCTCATCCATTGTGTTTCTTCTTGTTTTCCACATTATTTTTTATGGCCTCTGGTATATTGGTTTCGTTTCACGTGTAGCTGGAAAGAGACCAGAGATCTTGACCATTCTTCAAAATTGCGCCGTACTTAGTGTGGCATGCTGTGTATTTTATAGTCATTGTGGAAACCGTGCCATGTTAAGAGAAAAACCGCTTGAGCGAAAAAATTCAAACTGGTTTTCTTCTTTTTGGAAGAAAGAAGAGAGAAACACATGGCTTGCAAAGTTTCTTCGGATGAATGAGTTGAAGGACCAGGTTTGCTCATCTTGGTTTGCTCCAGTTGGATCTGCAAGTGATTATCCCCTTTTGTCAAAGTGGGTTATTTATGGAGAGATAGCCTGCAATGGTTCATGTCCTGGTTCATCAGATGAGATTTCCCCCATCTACTCACTTTGGGCTACATTTATCGGGCTTTACATCGCAAATTATGTGGTTGAAAGGTCAACAGGTTGGGCTCTCACTCACCCACTATCTGTTAAAGAATATGAGAAGGTAAAGAAGAAGCAGATGAAGCCTGAATTTTTGGACATGGTTCCTTGGTATTCTGGAACATCGGCTGATTTATTCAAAACAGTTTTTGATCTCCTTGTATCGGTGACCGTGTTCGTTGGCCGTTTTGACATGCGAATGATGCAGGCAGCAATGAGTAGGGTTGAAGATGGAACGCAGCAACGCGACCTTCTATATGATCATTTTAGTGAGAAGGATGATTTTTGGTTTGACTTTATGGCTGATACTGGTGACGGTGGGAACTCATCTTATGCCGTTGCACGGCTACTTGCAAGGCCTTCCATTCGTACACTGAAAGATGATTCTGAGGTTACTTTACCACGTGGTGACTTGCTACTTATCGGGGGTGATCTTGCGTATCCTAATCCATCAACATTTACATATGAAAGACGTCTCTTTGTTCCCTTTGAGTATGCTCTCCAACCTCCTCCATCGTATAAAGCTGAGCAGATAGCTGTGAATAAGCCCTTTGGAGATAAACTGAAACAGTATGATGGACCTCAGTGTTTTGTGATTCCTGGAAACCATGACTGGTTTGATGGACTTCAGACTTTTATGAGGTATATATGTCATAGGAGTTGGTTAGGGGGATGGCTAATGCCTCAGAGAAAAAGTTATTTTGCTTTGCAACTCCCTAAACGGTGGTGGGTTTTTGGGCTTGACCTTGCTCTTCATGGTGACATTGATGTTTACCAATTCAAATTCTTTACTGAACTGATAATGGAAAAGGTTCAAGAGGACGACTCTGTGATCGTTATAACTCACGAACCTAATTGGCTTACTGACTGGTATTGGAGCGATGTTACTGGGAAGAATATTTCACACCTGATTTGTGATTATTTGAAAGGAAGATGTAAGCTTCGAATGGCTGGGGACTTGCATCATTACATGCGTCATTCACATGTAAAATCAGATGGGCCTGTCCATGTCCACCATCTTCTTGTAAATGGTTGTGGAGGCGCATTTTTACATCCGACCCATGTTTTCAGTAAATTTGATAAACTTGATGGAGTTTCCTATGAATGCAAGGCTGCATATCCTTCCTTTGAAGATTCAAGCAGGATTGCATTAGGAAATATCCTTAAGTTTCGGAAGAAGAACTGGCAATTCGATTTTATTGGTGGCATCATATATTTTGTCCTAGTATTTTCAATGTTTCCACAATGTGAGCTGAATCACATTCTCAAAGATGATGCATTTTCTGGTCAATTAAGGAGTTTCTTTGGTACTGTATGGAATGGGTTTATATATATCCTACAGCACTCTTGTGTGTCATTTGTGGGAGCGTTAGTATTACTAATTTCAGCATATTCTTTTGTTCCACCCAAGTTGTCACGGAAGAAACGAGCAATGATTGGAATTCTTCATGTTTCTGCCCACCTTGCTGCAGCTCTGATTCTTATGTTGCTTCTTGAAATAGGCATTGAAATATGCATCCGCCATGATTTGCTGGCGACTTCAGGGTATCACACTTTATATCAGTGGTATCAATCTGTGGAAAGTGAACATTTTCCGGATCCAACTGGCCTCAGAGCTCGTATTGAACAATGGACATTTGGTCTTTATCCAGCTTGTATCAAGTATTTAATGTCTGCTTTTGATGTGCCAGAGGTCATGGCTGTCTCTCGAAACACTATTTGCAAAAATGGATTAGAGTCTCTTTCCAGAGGGGGTGCCGTAATCTATTATGCTTCTGTTTTTCTTTACTTTTGGGTTTTCTCTACTCCCGTTGTTTCCTTGGTGTTTGGGAGCTACTTATATATTTGCATTAACTGGCTTCATTTACACTTCGACGAAGCCTTCTCATCTCTCAGAATAGCTAATTACAAATCATTCACACGATTTCACATCAATTCTGATGGTAATCTTGAAGTTTTTACTCTGGCGGTTGATAAGGTTCCTAAGGATTGGAAGCTTGATTCTGATTGGGATAGAGAGATGAAAAATCCACAAATGTCAAGCCATTTGAGAAGCTTTCCGAGCAAATGGAGGGCGTCCGTTGCCAACCAGGACCCAGTACATACAGTCAAAATTGTTGATCATTTCGTTATTGATCGAACTGATGATAAGAATAAGAATGAATGTGGTACTGATTCTAACGGGCTAGATCAATGA 3066 0.4028 MVSDKQSAGLLDTLKMERVRTILTHTYPYPHEHSRHAIIAVAVGCLFFISSDNIHTLVEKLDNNIKWWSMYGCLFGFFYFFSSPFLVKTIKPSYSNFSRWYIAWILVAAVYHLPSFQSMGVDMRMNLSLFLTIYISSIVFLLVFHIIFYGLWYIGFVSRVAGKRPEILTILQNCAVLSVACCVFYSHCGNRAMLREKPLERKNSNWFSSFWKKEERNTWLAKFLRMNELKDQVCSSWFAPVGSASDYPLLSKWVIYGEIACNGSCPGSSDEISPIYSLWATFIGLYIANYVVERSTGWALTHPLSVKEYEKVKKKQMKPEFLDMVPWYSGTSADLFKTVFDLLVSVTVFVGRFDMRMMQAAMSRVEDGTQQRDLLYDHFSEKDDFWFDFMADTGDGGNSSYAVARLLARPSIRTLKDDSEVTLPRGDLLLIGGDLAYPNPSTFTYERRLFVPFEYALQPPPSYKAEQIAVNKPFGDKLKQYDGPQCFVIPGNHDWFDGLQTFMRYICHRSWLGGWLMPQRKSYFALQLPKRWWVFGLDLALHGDIDVYQFKFFTELIMEKVQEDDSVIVITHEPNWLTDWYWSDVTGKNISHLICDYLKGRCKLRMAGDLHHYMRHSHVKSDGPVHVHHLLVNGCGGAFLHPTHVFSKFDKLDGVSYECKAAYPSFEDSSRIALGNILKFRKKNWQFDFIGGIIYFVLVFSMFPQCELNHILKDDAFSGQLRSFFGTVWNGFIYILQHSCVSFVGALVLLISAYSFVPPKLSRKKRAMIGILHVSAHLAAALILMLLLEIGIEICIRHDLLATSGYHTLYQWYQSVESEHFPDPTGLRARIEQWTFGLYPACIKYLMSAFDVPEVMAVSRNTICKNGLESLSRGGAVIYYASVFLYFWVFSTPVVSLVFGSYLYICINWLHLHFDEAFSSLRIANYKSFTRFHINSDGNLEVFTLAVDKVPKDWKLDSDWDREMKNPQMSSHLRSFPSKWRASVANQDPVHTVKIVDHFVIDRTDDKNKNECGTDSNGLDQ 1021
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00291 1021 Pfam Calcineurin-like phosphoesterase 386 588 IPR004843 GO:0016787
Trre1g00291 1021 SUPERFAMILY Metallo-dependent phosphatases 383 646 IPR029052 -
Trre1g00291 1021 Gene3D - 385 692 IPR029052 -
Trre1g00291 1021 PANTHER CALCINEURIN-LIKE METALLO-PHOSPHOESTERASE SUPERFAMILY PROTEIN 16 1008 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00291 Trre-Chr1 2127277 2135105 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g00291 1 2127277 2135105 Trre1g00291 1 2127277 2135105 ECH