Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00287 ATGATGCAAGGAAGCTTGAGAAATGCAAGTAAAGGTGGAAAATCTTCAAGCATAGATAGAAAGTTAGCATTGCAACAAGATGTAGATAGATTGAAGAAGAAGCTTAAGCATGAGGAGAATATTCATAGGGCATTGGAAAGAGCTTTCAATAGACCTTTAGGAGCTTTACCTCGTCTTCCTCCTTATCTACCTCCATATATACTAGCACTTTTGGCTGAAGTGGCAGTTTTGGAAGAGGAAATAGTTAGGCTTGAAGAGAAAGTTGTGTATATCAGGCAGGATTTGTATCAGGAAGCTGTCTACATATCATCTTCTAAGCCTAAATTGGAGCATTCACCTCTTCCAAACAATTCAAACACAGAAGCAACAACAATGGACAGTCCAAAATTGGATAAATTGAAGTCTCTTTCACAAACAGTTGATAATCCAGCTACAACATCTACCACTAGGCCTACCATACCACTCCAAGAGAATAGACAAGGAAAAGAGAATAAATCATGCAGTAATTCTTTCAAGAAAAGGATGCAACCCTCGAAACAAATGACTAAAACTCCAATTAAAACTCTTCATGTTGACAATAAGTCATTGCATAAAAGGGCGCATCCTCCGAGAAGGAAGAAAGAACCACGGGTAAAAGATCAGCAAATGGCAGAACTAAGACATCCCAGTCCACACAAAATGTTACCAGAAGCTGACTGTCCAAATGTGATTTCTGAAAATATTCTAAAGTGCTTATCAAGTATTCTCTTGAGAATAAGTGCTGTGAAGAATCCAGGTTCTGCAGGCGACATATCATCGCCCTTATGGACTCCAAAACCTCAAAACCATATTGAAGGAACATGGTTTTGGGATCCGTACGGTATTTGTCTGGAATTTGGAAAGAGGGATATTGGTCCCTACAAGTATTTATCTGCAATTGATGCTAAATCTTTCAATGCAAAACGGACCACAAGCACTTTGTTTTTACTGCACCGGTTGAAACTTCTTTTTAGGAAGCTAGCTTCTGTCAACTTAGAGAACCTCAACCATCAGGAGAAGCTTGCATTTTGGATCAACACCTATAACTCATGTATGATGAATGCATTCGTAGAGAATGGCATTCCGGAGAGTCCTGACATGGCTGTGGCAATGATGCGGAAGGCAAAAATAAATGTAGGTGGACACATACTAAGTGCAACAACCATAGAGCATTTCATTTTAAGACTCCCTTATCACTACAAATTTACCCTTTCCAAGGGAGCGAAAAATCATGAAATGGTAGCAAGAAGCAAATATGGACTTGAACTGTCAGAACCCCTGGTGACATTTGCTCTCTCTTGTGGAACTTGGTCCTCCCCTGCTGTGAGAGTTTACACAGCATCCCAAGTGGAGAATGAACTAGAAGCTGCCAAAAGAGAATACTTACAGGCAACAATTGGAATTTCAACATCCAAGTTTGCTATCCCAAAGCTTTTGGATTGGTATTTACAGAACTTTGCAAAAGACTTGGAATCATTAATGGATTGGATCTGCCTTCAATTACCAAGTGAATTAGGGAAAGAAGCTATTAAGTTGCTTGAGAAAAGAAAAACTGAGCCCCTCTCACAATTTGTACAAATCATGCCATATGAGTTCAGCTTTAGATACTTGCTTTGCACATAA 1641 0.3937 MMQGSLRNASKGGKSSSIDRKLALQQDVDRLKKKLKHEENIHRALERAFNRPLGALPRLPPYLPPYILALLAEVAVLEEEIVRLEEKVVYIRQDLYQEAVYISSSKPKLEHSPLPNNSNTEATTMDSPKLDKLKSLSQTVDNPATTSTTRPTIPLQENRQGKENKSCSNSFKKRMQPSKQMTKTPIKTLHVDNKSLHKRAHPPRRKKEPRVKDQQMAELRHPSPHKMLPEADCPNVISENILKCLSSILLRISAVKNPGSAGDISSPLWTPKPQNHIEGTWFWDPYGICLEFGKRDIGPYKYLSAIDAKSFNAKRTTSTLFLLHRLKLLFRKLASVNLENLNHQEKLAFWINTYNSCMMNAFVENGIPESPDMAVAMMRKAKINVGGHILSATTIEHFILRLPYHYKFTLSKGAKNHEMVARSKYGLELSEPLVTFALSCGTWSSPAVRVYTASQVENELEAAKREYLQATIGISTSKFAIPKLLDWYLQNFAKDLESLMDWICLQLPSELGKEAIKLLEKRKTEPLSQFVQIMPYEFSFRYLLCT 546
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00287 546 Coils Coil 453 473 - -
Trre1g00287 546 MobiDBLite consensus disorder prediction 109 189 - -
Trre1g00287 546 MobiDBLite consensus disorder prediction 1 21 - -
Trre1g00287 546 MobiDBLite consensus disorder prediction 106 215 - -
Trre1g00287 546 PANTHER EXPRESSED PROTEIN 11 545 - -
Trre1g00287 546 Pfam Protein of unknown function, DUF547 339 468 IPR006869 -
Trre1g00287 546 Coils Coil 21 48 - -
Trre1g00287 546 Pfam Leucine-zipper of ternary complex factor MIP1 20 98 IPR025757 -
Trre1g00287 546 Coils Coil 67 94 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00287 Trre-Chr1 2085433 2088417 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g00287 1 2085433 2088417 Trre1g00287 1 2085433 2088417 ECH