Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00282 ATGGCACTGAACGATTTCTTCGCCGGAGAGATAGCAACAGAGCTTATAAAAATGCTCCTAAACATATCTAGAAAATCTCTGTTTTGCAGAACAAGCGCAGAACAACTCAAAACATACATCAATGAAATCCTTCCAACAATACGAGAAATCAAATACTCCGGCGTAGAGTTAACTGAGCATCGACAGTTTGATCTCGACCGCTTCTCGGAGATTCTACGTTCCGGCGTTGAACTCTCTCACAAAGTCCTCTCCTCAAGCAGATGGAACGTATACAAAAATCTGCAGCTAGCAAAAAAGATGGAAAAACTTGAAAAGAATGTGTCAAGATTCTTGCAGGGTCCTATGCAGGCACATATATTGGCTGACGTGCATCACACACGATTCGAGATGGCTGAAAGGTTCGATCGGGTTGATGCGACAAATAGGAAGTTGGAGCAGTATTTTGGTGCTATGAAGATTGGTGTGGGAGGTGGTGGGTGGGTTGAGGAAGCTGTGAGGTCTTGTATGGAGGAAGATGAGAATTGGGTTGAGGGTAATTGTGGGAATTTGAATTTGAGTGTTGGGTTGGATTTAGGGAAGAAGAAAGTTAAGGAGATAGTTATGGGAAGAGAGGATTTATGGGTTGTTGGGATTTGTGGGATTGGTGGATCTGGTAAAACTACTCTTGCTAGAGAGGTTTGTAGAGATGAACAAGTGAAAAGTTATTTCAAGGAGAAAATATTGTTTCTAACTGTTTCACAATCTCCAAATGTGGATCAGCTAAGGATAAAGATTTGGGGACACATCATGGGAAACAGAAGTTTGAATCCAAATTATGTCGTTCCTCAATGGGTACCACAATTGGAATTCAGAAATGAAGCTAGAACCTTGATAGTGCTTGATGATGTTTGGTCACTTTCAGTTCTTGAACAGCTTGTGTGTAGAATACCAGGTTGTAAGTTTGTTGTTGTTTCTAGGTTCAAATTCCCAACAATATTCAATGCAACTTATGAGGTTGAATTGTTGAGTGAAGAGGATGCTATGTCTTTATTCTGTCACCATGCTTTTGGACAGAAATCAATCCCTTTTACAGCTAATGAGAATTTGGTCAAACAGGTTGTGAGTGAATGTGAAAAGCTTCCATTGGCTCTAAAAGTGATTGGAGCTTCATTGAGAGATCAAACAGAAATGTTTTGGGAAAGTGTTAAAAACAGATTATCTCAAGGCCAAAGTATTGGAGAATCCCATGAAATCAACCTTATCGAAAGAATGGCGATAAGTATCAACTACCTTAGAGAAGAGATCAAGGAGTGTTTCTTGGACTTATGTTCATTCCCTGAGGATAAAAAAATCCCTCTAGATGTTCTCATCAATATGTGGGTTGAAATTCATGATATTGATGAGAAAGATGCTTTTGCTATTGTTGTTGAACTCTCCAATAAAAATCTTCTCACATTGGTGAAAGAAGCACGTGCTGGTGGCATGTACAGCAGTTGCTTTGAGATCTCAGTCACTCAACACGATGTACTTAGAGACCTCGCAGTTATATTGAGTAACCGCGAAAGTATTAATGAAAGGCGGCGATTAGTTATGCCAAAACGAGAGAAGGGACTCCCTAAAGAGTGGCTAAGACACAAACACAAACCATTTGAAGCACAAATTGTTTCAATTCACACAGGTGAAATGAAGGAAAGGGATTGGTATGAACTTGAATTTCCTAAAGCTGAAGTTCTGATTATAAATTTCACATCTAAGGATTACTTTTTACCTCCTTTTATAGATAGAATGCCAAATTTGAGAGCATTGATAGTGATAAACTATAGTGCATCCTATGCTTCTCTTCATAATGTTTCAGTTTTCAATAATTTGGCCAACTTAAGAAGCTTATGGCTTGAAAAAGTTTCTATCCCTCAATTTGGAGGCATTATCATGGAAAACTTAGGCAAGTTATTTATAGTCTTATGTAAGATTAATAACAATTTAGAGGGTAAAGATGTAAATCTGTCTCAAATCTTTCCTAGCCTCTCTGAACTCACTCTTGATCATTGTGAAGATGTTACTAACTTGCCCTCAAGCATTTGTAAGATACAGTCACTACAAAACTTGAGTCTCACTAATTGTCACAATTTGGCTCAACTTCCTGTCGAATTAGGCATGCTAAGTTCGCTAGAGATTCTCCGGTTATACGCTTGTCCGGAATTGAAAACGCTCCCTCGTAGTGTCTGCAACATGATTAGGTTGAAGTATATCGACATTTCGCAATGTGTTAACTTATCATGTTTCCCTGAAGAGATTGGTAAATTGGTAAGCTTGGAAAAGATTGACATGAGGGAATGTTCCATGATTAAGAATGTGCCAAAGTCTGCCATTTCATTGAAGTCTTTGAGGCTTGTAATTTGTGATGAGGAAGTGTTTGGTATTTGGAATGATGTTGAGAAGGCTAAGCCAAATGTTCATGTTCAAGTGTCAGAGCAGTACTTTGATTTGGAATTCCTTAGAGAGTGA 2484 0.3865 MALNDFFAGEIATELIKMLLNISRKSLFCRTSAEQLKTYINEILPTIREIKYSGVELTEHRQFDLDRFSEILRSGVELSHKVLSSSRWNVYKNLQLAKKMEKLEKNVSRFLQGPMQAHILADVHHTRFEMAERFDRVDATNRKLEQYFGAMKIGVGGGGWVEEAVRSCMEEDENWVEGNCGNLNLSVGLDLGKKKVKEIVMGREDLWVVGICGIGGSGKTTLAREVCRDEQVKSYFKEKILFLTVSQSPNVDQLRIKIWGHIMGNRSLNPNYVVPQWVPQLEFRNEARTLIVLDDVWSLSVLEQLVCRIPGCKFVVVSRFKFPTIFNATYEVELLSEEDAMSLFCHHAFGQKSIPFTANENLVKQVVSECEKLPLALKVIGASLRDQTEMFWESVKNRLSQGQSIGESHEINLIERMAISINYLREEIKECFLDLCSFPEDKKIPLDVLINMWVEIHDIDEKDAFAIVVELSNKNLLTLVKEARAGGMYSSCFEISVTQHDVLRDLAVILSNRESINERRRLVMPKREKGLPKEWLRHKHKPFEAQIVSIHTGEMKERDWYELEFPKAEVLIINFTSKDYFLPPFIDRMPNLRALIVINYSASYASLHNVSVFNNLANLRSLWLEKVSIPQFGGIIMENLGKLFIVLCKINNNLEGKDVNLSQIFPSLSELTLDHCEDVTNLPSSICKIQSLQNLSLTNCHNLAQLPVELGMLSSLEILRLYACPELKTLPRSVCNMIRLKYIDISQCVNLSCFPEEIGKLVSLEKIDMRECSMIKNVPKSAISLKSLRLVICDEEVFGIWNDVEKAKPNVHVQVSEQYFDLEFLRE 827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00282 827 Gene3D - 417 506 IPR036388 -
Trre1g00282 827 ProSiteProfiles RPW8 domain profile. 1 149 IPR008808 -
Trre1g00282 827 Pfam Arabidopsis broad-spectrum mildew resistance protein RPW8 9 133 IPR008808 -
Trre1g00282 827 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 435 IPR027417 -
Trre1g00282 827 Gene3D - 184 324 IPR027417 -
Trre1g00282 827 Pfam NB-ARC domain 195 414 IPR002182 GO:0043531
Trre1g00282 827 PRINTS Disease resistance protein signature 687 703 - -
Trre1g00282 827 PRINTS Disease resistance protein signature 370 384 - -
Trre1g00282 827 PRINTS Disease resistance protein signature 208 223 - -
Trre1g00282 827 PRINTS Disease resistance protein signature 283 297 - -
Trre1g00282 827 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 3 824 IPR039203 GO:0050832
Trre1g00282 827 Gene3D - 334 416 IPR042197 -
Trre1g00282 827 SUPERFAMILY L domain-like 570 791 - -
Trre1g00282 827 Gene3D Ribonuclease Inhibitor 548 807 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00282 Trre-Chr1 2046096 2049831 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre1g00282 601 804 Receptor kinase-like Gene Family AT5G27060 27.885 6.45e-09 57.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g00282 1 2046096 2049831 Trre1g00282 1 2046096 2049831 ECH