Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00264 ATGAAAACTTATGATAATGGATTAACTAAAGCACTTTACAATGATAATATATGTTCAATATCAACTTCTGATTCAGCTAGTAGTGAAAGTGAGTTAAGTCATGAAAATCCATTTATCTATAATCATCATCATCATGAGCCAACATTGAGATTAGGATTTGGAAACTCAGATTTGATGAATCCACATCATCATAATCATCATCTTCATCGTCATCAAGTACAAGGTGTATCAAGAAACTTCAACCATCAACACTTCCAACCTCACATCTATGGTCGCGATTTCAAGCGAAATACAAGAGTTGTTAATGGTGTCAAAAGAAGTGTTAGAGCTCCAAGAATGAGATGGACCACAACTCTTCATTCTCATTTTGTTCATGCTGTTCAACTTCTCGGTGGTCACGAAAGGGCAACACCAAAATCTGTGTTAGAACTAATGAATGTGAAGGATCTAACCCTAGCACACGTCAAGAGTCACTTACAGATGTATAGAACAGTGAAGACCACTGACAAATCAGGAGCAGGTCATGGGATGCTACAGACACAAGGAATTAATAATAATGTTCCTTTGCATGGAACTAATTCTTGTGAGAGACCAAATTTACCACAAGACAGGACATCTTGGCAACCATCAAAAGAGACAAATACAAACAATACTGAAGAAAAATCCGAAAATGGTTTGGTGTATTCTCATTTCAAGGAAAATGATACCATGGTGAAGAGGTTGGATTCTACCCAATTGTCACATTCCAACTCCATGATTGACTTAGAATTCACACTTGGAAGGCCTAATTGGGAAAAAGACCAAGCTGAATCATCAAGAGAATTAGCTCTTCTCAAGTGTTAA 843 0.3689 MKTYDNGLTKALYNDNICSISTSDSASSESELSHENPFIYNHHHHEPTLRLGFGNSDLMNPHHHNHHLHRHQVQGVSRNFNHQHFQPHIYGRDFKRNTRVVNGVKRSVRAPRMRWTTTLHSHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQMYRTVKTTDKSGAGHGMLQTQGINNNVPLHGTNSCERPNLPQDRTSWQPSKETNTNNTEEKSENGLVYSHFKENDTMVKRLDSTQLSHSNSMIDLEFTLGRPNWEKDQAESSRELALLKC 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00264 280 Pfam Myb-like DNA-binding domain 112 163 IPR001005 -
Trre1g00264 280 MobiDBLite consensus disorder prediction 190 225 - -
Trre1g00264 280 NCBIfam myb-like DNA-binding domain, SHAQKYF class 111 164 IPR006447 GO:0003677
Trre1g00264 280 Gene3D - 110 167 - -
Trre1g00264 280 PANTHER TRANSCRIPTION FACTOR KAN2-RELATED 25 268 IPR044847 GO:0000976|GO:0006355|GO:0010158
Trre1g00264 280 FunFam Myb family transcription factor 109 167 - -
Trre1g00264 280 MobiDBLite consensus disorder prediction 190 224 - -
Trre1g00264 280 SUPERFAMILY Homeodomain-like 108 164 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00264 Trre-Chr1 1918082 1922150 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Trre1g00264 Myb_DNA-binding 1.3e-05 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g00264 1 1918082 1922150 Trre1g00264 1 1918082 1922150 ECH