Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00251 ATGTTCCACAACAACAATCACCACCACACTCTTCCGATCTCACTCTCCGACGACGAAACCGATGAACTAGGTCGCATGCGTGTTCGCGCTCGTCGCAAACGGAAGAAACTCGGCAACAAACGTTTCATCAAGAAGCTTCTTGTCAAATACTGGATGCTACTCATCATTCTTCCAGCTGCGTTTTTGCTTTTTTATGAAGCTACACGAATTGGTCTTAGACCTAATTCTTCTTCCAACATTCTACGCAATCAAAATCATCCTCACGATCTACCTAGTTCCGATTTCGTTAAAGAATTGAACACCAAAACTAACTTGAATCGTCTTGATCCTACTACTCATGTTGTTGCTGGTGTTAGAGAACGTTGCTTGAAGCTTCTACCACCTGAAAAACTAGAGCAACTAGAGATTCCTGTGGAAGAAGAATCTAGTTTACCTATTGGTAAAGTCTTGTACATGTCAGGGAATGATGTGTCTTTTGTAGGAGGCAATGCTACATTGTCTCAATTGCGTGCGGAGGATACGAGTTTTAATTTATTTACTGGAAATCAAACATTTGAGGAAAGACAGAGAAGTTTTGAGGTGAAACAAACTACAATGGTACATTGTGGGTTCTACAGTGCGGATGGAGGGTTTAGGATATCTGATGAAGATAAAAATTTCATGCAAGGTTGCAAAGTGGTGGTATCTACTTGTGCATTTGGTGGTGGAGATGATCTCTATCAACCGATTGGAATGTCAGAGGCTTCGCTTAAGAAGGTTTGCTATGTTGCATTCTGGGATGAAATCACTCTAAAAGCACAGGAGTTGGTGGGTCGCAGAGTTGGGGACGATGGATTTGTTGGAAAATGGCGTGTTATTGTTGTTCGGGATCTTCCTTTTTCTGATCAAAGATTGAATGGCAAAATTCCCAAGATGTTAAGCCATCGGCTTTTTCCTCAATCAGAATACTCTATTTGGGTTGACTCCAAGTCCCAATTTAGGAGGGACCCACTAGGTGTGTTGGAAGCACTCCTATGGCGCACAAATTCTGTACTTGCTATATCAGAACACGGAGCTCGCAGTAGTGTCTATGATGAGGCTAAGGCTGTTGTCAAGAAAAACAAAGCCAAGCCGGAGGAAGTTGAAGTGCAGCTGAATCAATATAAAAAAGATGGCTTGCCTGAAGACAAGAGATTTAATGGAAAGAAAGCTCTATGTGAAGCCTCTGTTATCGTGAGGAAGCATACGCCATTAACTAATCTATTGATGTGTGTCTGGTTTAATGAGGTGGTTCGCTTCACTTCTAGGGATCAGCTCAGCTTCCCATATGTTCTGTGGCAGTTGAAAGCATTCAAAAATATCAACATGTTCCCTGTCTGCACCCGCAAGGATCTGGTTAATAGCATGGGACACATCCGCAAGGCAAAACCACTGCAAAAATGA 1422 0.4233 MFHNNNHHHTLPISLSDDETDELGRMRVRARRKRKKLGNKRFIKKLLVKYWMLLIILPAAFLLFYEATRIGLRPNSSSNILRNQNHPHDLPSSDFVKELNTKTNLNRLDPTTHVVAGVRERCLKLLPPEKLEQLEIPVEEESSLPIGKVLYMSGNDVSFVGGNATLSQLRAEDTSFNLFTGNQTFEERQRSFEVKQTTMVHCGFYSADGGFRISDEDKNFMQGCKVVVSTCAFGGGDDLYQPIGMSEASLKKVCYVAFWDEITLKAQELVGRRVGDDGFVGKWRVIVVRDLPFSDQRLNGKIPKMLSHRLFPQSEYSIWVDSKSQFRRDPLGVLEALLWRTNSVLAISEHGARSSVYDEAKAVVKKNKAKPEEVEVQLNQYKKDGLPEDKRFNGKKALCEASVIVRKHTPLTNLLMCVWFNEVVRFTSRDQLSFPYVLWQLKAFKNINMFPVCTRKDLVNSMGHIRKAKPLQK 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00251 473 PANTHER ALKALINE CERAMIDASE-RELATED 27 470 IPR006852 -
Trre1g00251 473 Pfam Protein of unknown function (DUF616) 171 464 IPR006852 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00251 Trre-Chr1 1807752 1810991 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g00251 1 1807752 1810991 Trre1g00251 1 1807752 1810991 ECH