Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00250 ATGGCAGTTTCCTTATCATCTCTAACATCTTCCCTCTCTTCACTCTCTTTCTCTTCCAACATCTCTCGCAAGCCAACCTCCATTTTCCTCCCCAAAACAACAACCTTCTCCCGCTCTCCCAAATTCCCCTCATTCACTGTAACCGCTACTACAGCAGACATTGCTCTTGCTGAACCCGAAATCGCTGACCTCAAGAAATACGTCAAATCTAGACTTCCCGGTGGTTTTGCTGCCCAAACTGTCATCGCTACCGGTCGCCGGAAAACTGCTGTTGCTCGTGTTGTTCTTCAAGAAGGAACTGGCAAAATCATTATTAATTACCGTGATGCTAAGGAATATCTTCAAGGAAATCCGCTATGGCTTCAATACATTAAGATTCCCTTAATAACTTTGGGATATGACACTAGTTATGATGTGTTTGTTAAAGCCGAGGGCGGCGGCCTCTCTGGTCAAGCTCAGGCGATCACCCTTGGCATTGCTCGTGCGTTGCTAAAGGTGAGTGAAAGTCATAGAGGACCTCTGAGACAGCAAGGACTTCTGACCAGAGATGCAAGAGCTGTTGAGAGGAAGAAAGTTGGTCTCCATAAAGCTCGTAAAGCTCCTCAATACTCCAAACGTTGA 621 0.4622 MAVSLSSLTSSLSSLSFSSNISRKPTSIFLPKTTTFSRSPKFPSFTVTATTADIALAEPEIADLKKYVKSRLPGGFAAQTVIATGRRKTAVARVVLQEGTGKIIINYRDAKEYLQGNPLWLQYIKIPLITLGYDTSYDVFVKAEGGGLSGQAQAITLGIARALLKVSESHRGPLRQQGLLTRDARAVERKKVGLHKARKAPQYSKR 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00250 206 PANTHER RIBOSOMAL PROTEIN S9 68 206 IPR000754 GO:0003735|GO:0005840|GO:0006412
Trre1g00250 206 SUPERFAMILY Ribosomal protein S5 domain 2-like 80 206 IPR020568 -
Trre1g00250 206 FunFam 30S ribosomal protein S9 76 206 - -
Trre1g00250 206 Pfam Ribosomal protein S9/S16 85 206 IPR000754 GO:0003735|GO:0005840|GO:0006412
Trre1g00250 206 Hamap 30S ribosomal protein S9 [rpsI]. 76 206 IPR023035 -
Trre1g00250 206 Gene3D - 72 206 IPR014721 -
Trre1g00250 206 ProSitePatterns Ribosomal protein S9 signature. 145 163 IPR020574 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00250 Trre-Chr1 1804410 1805964 Proximal
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g00250 1 1804410 1805964 Trre1g00250 1 1804410 1805964 ECH