Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00235 ATGAAAGATCAGTTCAAAGAAGCTCCTCAATTCTACAACTCAGCATATTGTGCCTCTATCACTGAACTTGAACCAGAACCAGACACCGAACCAGACACAGACACCGACACATACTACATCTGCTCTGAGGAAGCAGTACATGTGGCAATGACATTAGACACAACATACATCAGAGGATCCATGGCTGCAATCCTCTCAATCCTCCAACACACATCATGTCCAGAAAACATCATCTTTCACTTTGTTTGTTCTTCAAACATTTCACTTCTCCGCTCCACAATCTCAAAATCATTCCCTTACCTCAAATTCCAAGTCTACAATTTCGATGAATCGGTCGTTTCAGGACTAATCTCATCCTCGATTCGATCAGCGCTCGATTGTCCTTTAAACTATGCAAGAAGCTATTTGGCAAATCTACTTCCATTATGTGTTAGAAAAATTGTTTACTTAGATTCAGACCTTATCTTAGTTGATGATATCATAAAACTTGCATCAACACCATTAACCGAAAAAAATGCAGTATTAGCAGCACCGGAATATTGCACTGCAAATTTCACATATTACTTCACATCAACATTTTGGTCCAACCCATCTTTGTCTTTAACATTCGCGAATCGAAAAGCTTGTTACTTTAATACCGGGGTTATGGTAATCGATCTAGAAAAATGGCGCGAAGGCGATTACACTACGAAGATAGAAGAATGGATGGAGTTGCAAAAACGGATAAGAATCTACGAACTCGGTTCATTGCCACCTTTTTTACTTGTTTTTGCAGGTGAAATTGTTCCTGTGGATCATAGATGGAATCAACATGGTCTTGGTGGTGATAATTTTCGAGGTCTTTGTAGATCACTTCATCCTGGTCCAGTGAGTTTATTGCATTGGAGTGGAAAAGGTAAACCATGGGTTAGATTGGATGCTAATAGACCTTGTCCTTTGGATGCTCTTTGGGAACCTTATGATCTTTTGAAGACACCATTTTCTCTTGAATCTTGA 996 0.3936 MKDQFKEAPQFYNSAYCASITELEPEPDTEPDTDTDTYYICSEEAVHVAMTLDTTYIRGSMAAILSILQHTSCPENIIFHFVCSSNISLLRSTISKSFPYLKFQVYNFDESVVSGLISSSIRSALDCPLNYARSYLANLLPLCVRKIVYLDSDLILVDDIIKLASTPLTEKNAVLAAPEYCTANFTYYFTSTFWSNPSLSLTFANRKACYFNTGVMVIDLEKWREGDYTTKIEEWMELQKRIRIYELGSLPPFLLVFAGEIVPVDHRWNQHGLGGDNFRGLCRSLHPGPVSLLHWSGKGKPWVRLDANRPCPLDALWEPYDLLKTPFSLES 331
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00235 331 SUPERFAMILY Nucleotide-diphospho-sugar transferases 46 322 IPR029044 -
Trre1g00235 331 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 47 311 IPR029044 -
Trre1g00235 331 PANTHER GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN 4 324 - -
Trre1g00235 331 Pfam Glycosyl transferase family 8 47 304 IPR002495 GO:0016757
Trre1g00235 331 FunFam Hexosyltransferase 47 311 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00235 Trre-Chr1 1721985 1722980 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g00235 1 1721985 1722980 Trre1g00235 1 1721985 1722980 ECH
Trre1g00235 1 1721985 1722980 Trre5g05557 5 55986601 55987822 PCT