Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00221 ATGAAATTAAAGTCTAAGAAAGGATGGAAATCTATTATACCTCTTCATTTAAAAGGAAAATCACCGGCGACTCGTTTTTCTTTATTTCGCAAAGTCAATTCAGCTAGCCATGGACCTGGTAAAACTCCGGTTTATCTTAATGTGTATGATTTGACACCTAAGAATGGCTATGTGTATTGGGCCGGTCTTGGTATCTATCACTCTGGTGTCGAAGTTCATGGTGTAGAATATGCATTTGGGGCTCATGACTACCCTACAAGTGGTGTCTTTGAGGTCGAACCTCGGCAATGCCCAGGCTTCAAGTTCAGGAAGTCAATATTCATCGGAACTACGTCTCTGGATCCTGTTCAGGTCAGGGAGTTCATGGAATGCGAGTGTGCAAACTACAATGGCGACACATATCACTTAATTGCTAAGAACTGCAATCACTTCTGCAAAGACATATGCTACAAGCTGACGGGGAAATCGATTCCAACTTGGGTAAATCGGCTTGCCAAGCTAGGTTCAATTTGCAACTGCATTCTACCTGAGGCATTAAGAATTTCTGCTGTGGGGCATGAACCAAAATATGAGGCTAATGATAGTGAAAAGAAAAGGCTAAGAAGTGCTTTCAATTCATTATCTTCAATTTCAATGCGTCAAAAGCAGCTATCAAAATCTTCATTGTTTCTACAATCACCCTTAAGAGGCTGTTTATCATCAAAGTGGCCATCATGGGAATTAAGCAAGTCTATTAATCGTTCCTTCAAAGAGAGGTAA 759 0.4071 MKLKSKKGWKSIIPLHLKGKSPATRFSLFRKVNSASHGPGKTPVYLNVYDLTPKNGYVYWAGLGIYHSGVEVHGVEYAFGAHDYPTSGVFEVEPRQCPGFKFRKSIFIGTTSLDPVQVREFMECECANYNGDTYHLIAKNCNHFCKDICYKLTGKSIPTWVNRLAKLGSICNCILPEALRISAVGHEPKYEANDSEKKRLRSAFNSLSSISMRQKQLSKSSLFLQSPLRGCLSSKWPSWELSKSINRSFKER 252
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00221 252 SMART DUF862_2a 42 180 IPR008580 GO:0008233
Trre1g00221 252 Pfam PPPDE putative peptidase domain 43 177 IPR008580 GO:0008233
Trre1g00221 252 PANTHER DESUMOYLATING ISOPEPTIDASE 40 221 IPR008580 GO:0008233
Trre1g00221 252 ProSiteProfiles PPPDE domain profile. 42 179 IPR008580 GO:0008233
Trre1g00221 252 Gene3D PPPDE domains 38 190 IPR042266 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Trre1g00221 Trre-Chr1 1604953 1606799 Dispersed/Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g00221 1 1604953 1606799 Trre1g00221 1 1604953 1606799 ECH