Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00206 ATGGCTCAAAACTCAACTTCCGATACTCGTCTCAACGCTAACTCTGCTCCTCCATTGCAGATCTCCAAAGATGTCCAAGGCTCTGACAATCCTATTCCACTTTCACCACAATGGCTTCTGTCAAAGCCAGGGGAGAATAAATCTGGAACAGGACTTATGGAAAACCATGTGATCTCAAATCCATCACATGGCAGTCGCCCAGAGACTGTTAAGATATCTGGTGATGGAGAGGATGCACAGAAGAAAAAGGACGTCTTTAGGCCATCCATGTTTGACTCTGAAAGTGGACGTCGTGATCGTTGGCGTGATGAAGAGAGAGACACTGAGAGAGACACTAAGTCCTCCATACGTAAGGATCGTTGGAGGGATGGGGACAAAGACCTAGGTGATTCTCGAAAGGTGGATCGATGGGGAGAAAATCCAGCTCCAAAGAACTTAGGAGAAGCACGTCGTGTTACATCTGATAGTCACAGATGGAATGATTCAGGAAACCGGGATGCTAACTTTGATCAGCGGCGTGAGAGCAAGTGGAACTCACGCTGGGGTCCTAATGATAAGGATCCAGAAGGTCTTCGTGAAAAATGGAGTGATTCAGGAAAAGATGGTGATACACATCTGGATAAAGGTTTGTCTCATGGGAAGGATGAGAAGGACGGAGATCACATTCGACCATGGAGACCTAACTTTGCACAAAACCGTGGAAGGGTAGAGCCTCCTCATTCCCAAAGCACACCGCCACACAAACAAGGCTCTACATTTTCCTATGGCCGTGGTCGTGCGGAGAATACACCTCCACCAGTCTTCAGTCCCGGACATGGCCGTGGTGGCTCTGGTGGTAGCTCTTTCAATAGCACATATCCTGGAACTGCATTAGACAAAGCAGAGAGTGGACACGAAGATCCTTGCCCCTTCAGTTATAACAGGACAAGATTGCTTGATGTGTACAGAGTTACTAACATGGGCAGAAATAGGAAATTTGTTGATGATTTTGTGCAGGTTCCAAGTCTTACACAGGATGAACCATTGGAGCCTCTTGCTCTTATGACACCAAGTTCCGAGGAACTGTCTATCTTAAATGGTATTGACAAAGGAGAGATAATTAGTAGTAGTGCACCTCAAGTGACCAAAGATGGAAGGGGCTCAACAGATTTCACTCATACTAGACGTATGAAGCCTGGAACCACTCCTCTCCAAGATAGAGGTGAAGATGGAGGTTCTTACAAAGTTGCCGATGAGTTATCCAGTAATAGAGATTCATCCTTTGAAGGAAATAGTTCTCTTCATTCTGGTGCTGCATGGCGAGCCAATAGCAGAGATGAACATACAGGTACTCTCTTGCACAATAGCAGAGATGTACCTAGTGATGTTAGACTAAGGAAATCAGATGAGAGTTCGCACCAGCCAAAAGATCCTCAAAGTCACTGGGAAAGTAAATTGGGTTTTGTATCTGAGCCCAAAGAAGTAGGTAAGTGGAGCGCTAGTGAAGATCACATTGTTAAAAGGCAGCCATCTGGTACTTTGGAAAGTGAACATGGAACCAGAAGAGTTCCTCCGACTGCTCCAGAGGAGTTATCTCTTTTGTATAAAGATCCCAAGGGTCTAATCCAAGGCCCATTTAAAGGAATTGATATTATTGGATGGTTTGAGGCTGGATATTTTGGTATTGATTTACCTGTTCGTCTGGAAAATTCAGCAGCTGACTCACCATGGTTTTCTCTTGGTGATGTCATGCCACATTTACGAGCTAAAGCCCGGCCACCACCAGGATTTTCTGCACCGCAGCCTGAATTGGCAGATATAACTGGCCGCCAAAATCCTGCTACATTTGGAAATGCTGTCTCTGGCTTGAGTGAGGTTGAGATGTTGAAAAGCGATTCTAGACATCGGCAAGGTCCTGATACCGGAATTGAAAATAGGTATCTGGAGTCGCTCATGTCTGGTAACAGGAGCAGTCCTACAATTAACAACCTGGCATTATCAGAAGGTTTCCAAGGTTTTGCTGGAAATAATTCTGGCAATCTGGGCCCATCAGGAGTAGATAGTGGAAGCAACATTTACTTGCTTGCGAAGAGGATGGAGCTTGAACGCCAGATGTCCTTACCCACCAATTCATATCCATATTGGCCAGGGCAGGATGCAGCATCCCTTGCTCCAAAATCAGATGTCCCAGATGTATCATTGCATTCAAAGCTCCTGTCTTCAGTGAGCGACAATTCGCGTCAACCTCAGTCCCAAAGTTCCGAGTGGTTGTCGTTAATCCAAGGATTATCTGACAGGACATCTGCAGGCATAAATAATGCCACTGCTGGATGGCCAAATAACCCCTTACAAGGTGGAATGGATCTCCTTCAGAATAAAGTTGACCCACGACATGATCAGAATTTCCCTCAAATGCCATTTGGAATTCAACAACCAAGGCTGACACCACAAAATCAGTTGTCTTTAAGCAATTTACTGGCTCAAGCCGCAGATAGCCCAGCCAGTTCTTTGACAGCAGAGAAGCTACTATCTTCTGGTTTATCGCAAGATCCTCAAATAGTGAATCTGTTGCAACAGCAATACTTGTTGCAGTTGCATTCTCAAGCAGCTGCTTCAGCACCGCAGCTGCCCCTGTTAGATAAACTCTTGTTGCTGAAGCAGCAGCAGAAGCAGGAGGAGCAGCAGCTGCTCTTGCGGCAACAGCAGCAACAACTGCTTTCCAAAATGCTGCAGGACCAACAGTCTAGCCAGCTTTTTGGCAATTCATCTTATGGACAGTTGCAAAGTCAATTACCAACGGGAAATTTGCGTGTGGATCCTTCTCAACTTCAACCCCCACAAGAGATTTTTCCCGTGAGCTCCCAGATACCAATTCCTAGTGTGCACAGTGACCTTAGTACCGACTCTATGAATTTGCATCTTAAAGTCAGCCAAGACACAAGTTATACAGTTAACAGTAAAGCTTCTACTATGCGTCTGCCTCACCAGTTATTTGGGGATACTATTCCTCAAAATAACTGGGCACCTACTCTTGCTGAGCAAATTAATGAGAATCATAAAAAGGAAATTGCATCTCCTCATGTTGAGAGTTCTCTTGTGAATGACCTGAACAGATCCAAAGAGGAACCCCACATTGTGCAGGAATCTGTTTTTGACTACACTGCTAAGTCATCGGAGCAGCTTCAGGACAATGCCTTGAAACCTGACAATGGTGCGATACCGGCAATTTCTATGCCTTCTATACATTTACAGAGTGATGCACCTGCTGTTGATAAATCTTCAGCAGGATCTAGTGAGGTTGAGTTACTCCCAGCAAGTCGTGGTTCAGATGTGAAGATCAAATCAGATATTGCACATCAAGAGCAGCTGGCTGGAATAGACAGCTCCAATGCTGTGCATGTTGAAACACATGAACCCAAAAAGGTTAATGAGAAGAAATCTAAGAAGCAAAAATCTAGCAAACAGTCTTCTGACCAATCAAAGGGATTGCTGAAGAACACAAGTTTGCAGCCATCAAAGCAGTCAGAAGTTGAAATACCAAATTTTAATGAGTTGGGGGGAACAAACAAAGATGAACCACATGAAACATATCTGCAGAAAACAAGAAGTAAGGTAAGTCATGTTGAAGAAACTGATGCCCTAGAGACAGCTGAATATCGTGAAACAGTCTTTGCAGGCGATTCTAAGGCAGTTTCTTCTGTTTCTTCAATCAATGCCGAAGTTCCTGCTGGACGAGCTTGGAAACCCGCTCCAAGTGTCAAGGCAAAGTCTTTATTAGAAATTCAACAGGAAGAACAGAGAAAGGCACAGACAGAAACACTTGTATCTGATGTTACTGCTTCTGTCAATTCCATGAGTCTGGCAACACCCTGGGCTGGGGTTTCGTCATATCCAGACTCTGTTAAGGTATCTAGTGAAAGTCGCGGAGGAAACAATACAGAATCTCCTGTTAATGCTCAAATTTCTCACAATCTGAAGAGCAAGAAAAGTCCGCTCCATGATCTATTAGCTGAAGAAGTTTTGAAGAAATCTAATGAAAAAGAAGTGGAGGTTCCAGATAGCACATTGTCTTCGCATGATATTGCTGTGCATTCAGAATCAACAGATGGTAGTAACTTCATTGAGGCAAAAGATACTAAAAGAAGTCGCAAGAAGTCAGGAAAATCAAAGGGTTCAGGAGTTAAAGCCCCAGTTCCAGTTGCGTCCGCTGAAGTTCCTATATCCTCAAGCCCTGTTGAAAAGATTAAAAGTTCCCGATCTGCACAGCAGGAAAAAGAAGTGTTGCCTTCAATCCCTGCAGGACCCTCTCTGGGAGACTTTGTTGTTTGGAAAGGAGAGCGAGAGCAACCTATCCAATCTTCTTCTCCGGCATGGTCTACTGATTCTGGTAGGGTTCCCAAACCAACTTCCTTAAGGGACATTCTGAAGGAGCAGGGGAAAAAAACTTCTGCAGTTCCTGCAAGCCCAGTGCCTGCGCCTCAGAAATCCCAGCCTGCCCAAGCTAATTGGAATAGTACTTCTTCACGGTCAATTTCAGCTTCCTCTCCATCTAAAGCCGCATCTCCACTTCCAATAAACTCACATGCTTCTAATCAATCAAAATATAAAGGGGATGATGACTTGTTCTGGGGTCCAATTGAACCATCTAAGCAAGAAACTAAGCAATCAGATTTCCCTCAGCTGGCTAGCCAAGGAAGCTGGGGATCCAAAAATGTACCCTTGAAAGGTAATTCATCGGGATTATTAGCCCGGCAGAAATCAGCAAGTGGCAAACCAACTGAGCGACCTCTATCATCATCACCTGCCTCTTCTCAATCGGCGCTGAAACTGAAAAATGATGCCATGACCAAGCATTCTGAGGCAATGGGCTTCAGAGATTGGTGTGAGAATGAGTGTGTCAGGCTTATTGGGACTAAAGATACAAGTTTCCTTGAATTTTGCTTGAAGCAATCCAGATCAGAAGCTGAGACGCTTCTTATAGAAAACCTTGGATCATTTGACCCCGACCATCAATTCATCGATAAATTCCTCAATTACAAGGAGATGTTACCATCGGATGTGTTGGACATAGCTTTCCAGAGTAAGCATGGTAAGAAAGTTAACGGACTTGGCGCTAGTGCCATGGCATCAGCTAATGCAGATATACAGGATGTGGACCACACTGAAGGATCTTCCAAAGGAGGTGGAAAGAAGAAGGGCAAAAAGGGGAAAAAGGTTAGCCCTTTAGTTTTGGGATTTAATGTTGTGAGTAATCGGATCATGATGGGTGAGATCCAGACTGTAGAAGATTAA 5271 0.4451 MAQNSTSDTRLNANSAPPLQISKDVQGSDNPIPLSPQWLLSKPGENKSGTGLMENHVISNPSHGSRPETVKISGDGEDAQKKKDVFRPSMFDSESGRRDRWRDEERDTERDTKSSIRKDRWRDGDKDLGDSRKVDRWGENPAPKNLGEARRVTSDSHRWNDSGNRDANFDQRRESKWNSRWGPNDKDPEGLREKWSDSGKDGDTHLDKGLSHGKDEKDGDHIRPWRPNFAQNRGRVEPPHSQSTPPHKQGSTFSYGRGRAENTPPPVFSPGHGRGGSGGSSFNSTYPGTALDKAESGHEDPCPFSYNRTRLLDVYRVTNMGRNRKFVDDFVQVPSLTQDEPLEPLALMTPSSEELSILNGIDKGEIISSSAPQVTKDGRGSTDFTHTRRMKPGTTPLQDRGEDGGSYKVADELSSNRDSSFEGNSSLHSGAAWRANSRDEHTGTLLHNSRDVPSDVRLRKSDESSHQPKDPQSHWESKLGFVSEPKEVGKWSASEDHIVKRQPSGTLESEHGTRRVPPTAPEELSLLYKDPKGLIQGPFKGIDIIGWFEAGYFGIDLPVRLENSAADSPWFSLGDVMPHLRAKARPPPGFSAPQPELADITGRQNPATFGNAVSGLSEVEMLKSDSRHRQGPDTGIENRYLESLMSGNRSSPTINNLALSEGFQGFAGNNSGNLGPSGVDSGSNIYLLAKRMELERQMSLPTNSYPYWPGQDAASLAPKSDVPDVSLHSKLLSSVSDNSRQPQSQSSEWLSLIQGLSDRTSAGINNATAGWPNNPLQGGMDLLQNKVDPRHDQNFPQMPFGIQQPRLTPQNQLSLSNLLAQAADSPASSLTAEKLLSSGLSQDPQIVNLLQQQYLLQLHSQAAASAPQLPLLDKLLLLKQQQKQEEQQLLLRQQQQQLLSKMLQDQQSSQLFGNSSYGQLQSQLPTGNLRVDPSQLQPPQEIFPVSSQIPIPSVHSDLSTDSMNLHLKVSQDTSYTVNSKASTMRLPHQLFGDTIPQNNWAPTLAEQINENHKKEIASPHVESSLVNDLNRSKEEPHIVQESVFDYTAKSSEQLQDNALKPDNGAIPAISMPSIHLQSDAPAVDKSSAGSSEVELLPASRGSDVKIKSDIAHQEQLAGIDSSNAVHVETHEPKKVNEKKSKKQKSSKQSSDQSKGLLKNTSLQPSKQSEVEIPNFNELGGTNKDEPHETYLQKTRSKVSHVEETDALETAEYRETVFAGDSKAVSSVSSINAEVPAGRAWKPAPSVKAKSLLEIQQEEQRKAQTETLVSDVTASVNSMSLATPWAGVSSYPDSVKVSSESRGGNNTESPVNAQISHNLKSKKSPLHDLLAEEVLKKSNEKEVEVPDSTLSSHDIAVHSESTDGSNFIEAKDTKRSRKKSGKSKGSGVKAPVPVASAEVPISSSPVEKIKSSRSAQQEKEVLPSIPAGPSLGDFVVWKGEREQPIQSSSPAWSTDSGRVPKPTSLRDILKEQGKKTSAVPASPVPAPQKSQPAQANWNSTSSRSISASSPSKAASPLPINSHASNQSKYKGDDDLFWGPIEPSKQETKQSDFPQLASQGSWGSKNVPLKGNSSGLLARQKSASGKPTERPLSSSPASSQSALKLKNDAMTKHSEAMGFRDWCENECVRLIGTKDTSFLEFCLKQSRSEAETLLIENLGSFDPDHQFIDKFLNYKEMLPSDVLDIAFQSKHGKKVNGLGASAMASANADIQDVDHTEGSSKGGGKKKGKKGKKVSPLVLGFNVVSNRIMMGEIQTVED 1756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00206 1756 ProSiteProfiles GYF domain profile. 523 574 IPR003169 GO:0005515
Trre1g00206 1756 CDD GYF 523 580 IPR003169 GO:0005515
Trre1g00206 1756 MobiDBLite consensus disorder prediction 1542 1600 - -
Trre1g00206 1756 MobiDBLite consensus disorder prediction 1441 1459 - -
Trre1g00206 1756 MobiDBLite consensus disorder prediction 235 258 - -
Trre1g00206 1756 MobiDBLite consensus disorder prediction 1707 1730 - -
Trre1g00206 1756 MobiDBLite consensus disorder prediction 1332 1347 - -
Trre1g00206 1756 MobiDBLite consensus disorder prediction 1126 1148 - -
Trre1g00206 1756 MobiDBLite consensus disorder prediction 489 508 - -
Trre1g00206 1756 MobiDBLite consensus disorder prediction 368 521 - -
Trre1g00206 1756 SMART gyf_5 524 579 IPR003169 GO:0005515
Trre1g00206 1756 MobiDBLite consensus disorder prediction 1283 1311 - -
Trre1g00206 1756 MobiDBLite consensus disorder prediction 1117 1206 - -
Trre1g00206 1756 Coils Coil 877 897 - -
Trre1g00206 1756 MobiDBLite consensus disorder prediction 1181 1206 - -
Trre1g00206 1756 MobiDBLite consensus disorder prediction 52 67 - -
Trre1g00206 1756 SUPERFAMILY GYF domain 516 580 IPR035445 -
Trre1g00206 1756 MobiDBLite consensus disorder prediction 1 302 - -
Trre1g00206 1756 MobiDBLite consensus disorder prediction 1077 1101 - -
Trre1g00206 1756 MobiDBLite consensus disorder prediction 1332 1600 - -
Trre1g00206 1756 MobiDBLite consensus disorder prediction 1149 1175 - -
Trre1g00206 1756 Pfam GYF domain 528 570 IPR003169 GO:0005515
Trre1g00206 1756 PANTHER GYF DOMAIN-CONTAINING PROTEIN 1 1756 - -
Trre1g00206 1756 MobiDBLite consensus disorder prediction 440 473 - -
Trre1g00206 1756 MobiDBLite consensus disorder prediction 150 224 - -
Trre1g00206 1756 Gene3D - 510 590 IPR035445 -
Trre1g00206 1756 MobiDBLite consensus disorder prediction 276 290 - -
Trre1g00206 1756 MobiDBLite consensus disorder prediction 70 139 - -
Trre1g00206 1756 MobiDBLite consensus disorder prediction 1404 1418 - -
Trre1g00206 1756 MobiDBLite consensus disorder prediction 1487 1525 - -
Trre1g00206 1756 MobiDBLite consensus disorder prediction 412 432 - -
Trre1g00206 1756 MobiDBLite consensus disorder prediction 1 35 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00206 Trre-Chr1 1499349 1508626 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g00206 1 1499349 1508626 Trre1g00206 1 1499349 1508626 ECH
Trre1g00206 1 1499349 1508626 Trre5g05573 5 56088467 56096338 PCT