Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00172 ATGGAGTTCGGAGCTACCACAGCAACGCTAACAAAGAAACATTCAAACAGCTACGGCGTTTCCGGAAGATCTGCTTACGACGGCGTTTTCGCTACTCCTATCAAGCTAAGAGCTCAGAGTTTTTCTCAATCTGATGATTACAACGAGATTTTTGGTAGCTCCGGAGCTTCTTCTTCGATTCCGATTCTCGAACTTCCGGAGCTCAAAGAGAGGAGAGTAATGACGGAAGATGTTCGTCACTCGAAGCTCGATTACTCGAATGTCTTCGGAGGTTTCGAGAATCTAGACGCTGCTGTGCCGTTCGAGGAGGTGGTTGTTAAGCCTAAAGAGAAAAGTAGTTTCACAAACGGAGCAGCAAAACGGAACAAAGTCAAAAGTGGAGAACAATCTTTCCGGGAAGATCGTACTAATTCTTCAAAGGAAATTCCGGCGGTATCGCCTTCATTTAATGGTGCCAAAAGGATCAACATGTCATATCATAAAGTTAGCCAAGGAAATGAAAATGGAGCAAATGGGACAACACATATAGCTCAACTCCATGCTGTTCCTGCTTACACTCGTTTAATTGAAGAAGTCAATTCAGTGAAGATGAACGGAGCTAAGTCAACACCAGCACCAGTAGCACAAGATACTTCTTCTGGTAGTCATTGTGACGAGGGGATAAAAGAAGGTGGACATTGTGCTAAATCATTTGTCGATCCTTCACCTAATAATGCCAAGAAACAATCTTCCAATAATGGAGGGAAAGATATAAATAGATCCGAGTCTGACTCTGTTGACCTGTTTTATGATGCATGCGAGATTAGCAATGGAAGTGATGGAATTCATGAAGTCAAAGCTCATCCTTCACAGACTGCGACAGCTAATTTGGATATTAATAATAATAACGTTGATGCTTCGAGATCAACGGAAACCAACTGCCAAACATCTAAAAGTGGCAGATATGAAAGTCCTGCTGGTGCTGATTCGCCAACATACTTAGAGGATACGGTTGACTCAAATTCAGCTGCAGCAGCTTCTGTAGCTGCTTTAAGGAAGGCAATAGAAGAGGCTCAAGTAAGAATAAAGGTTGCAAAAGAATCAATGAGAAGAAAGAAAGAAGGCTATCCTGATCGTGTCAAACAGAAGTCAAGTATTGACTTGAAAGTCAGAGAAAAAAAGGAAGCTAAACTTGCATACAAAACAACGAAAGTCAAAGAGATTAATTCAAGGCAAACATTTGGAGAAATGGATGCTTTGATGCCAATGAGAACAGAGAAAGTGAGATCAGATATTGGGGATAAAGAAACGTGTACTGCTAACGAAGCTGTACAAGAAGCACAGAAGAAATTGAAATTGTCTCGAGCAGAACATAAGGAAGATGTTGAACTGAAAGAAGCAGATCAGAAAGGAAAAGATCTTGAGCTTAAAGAGGCAGGAAATGCTAAGAATGTCCCATATGATAGGAATGCTTCGGTAAAGCCAGATGAATTTGATCATTCAGTAGAAATGGTTAAGGAATATTTGGAACAGGAGAACTATAAAGAAGAAGCCAGTGCAGATAACGAAGAAGGTTCTAGTGGAGAACTTGTCCATGAAACTAAGCATAGGTGTCAAGAAGTAGTTGGTGAAACAATACTGATTCGGGAGACACTTGACAGTGGAGGGACAGACAAAAGATTGAAGGTTAATGAAGTTGAGAACAAGGTTACACCGTTTGATGAACCAAATGGCCATGTAATTAACCTAGGTGGGAAACCGTCAATGACAGGAAATAAAGAAAATATTGCCTATAAGCCAGAAGATGGTAAGAAGGCTAAATGGTCCATTGATCCAGAAGAATGCCAAAAAATATTGAGAGCTATTCAGGAACTGGGAAAAGGTGAGAAACACATTTCTCAAGAGCAAAAAGAAAGTGACGATGAAGTTGAATTGGTCGGTGGGCTGGAAGAATGTGAATTGACAGAGTCTCGGGAGCCAACTGACAGTGAGGGACCGTGCAGTCCTGATCGTTCAGAATTAATAAGCACGGACAAAGAAATATATAACTCAGGGTGTTTAGAGGACAAAGAGAGAAGGAATACATCTGATTTTTCGGATGTAAATCAAGAGGTAGAACATTCCTATTCTCGAGAAGCCACTGATAGTACATTTGGGGATATATATGTGCAGGAAATACTGGAGGATATTGTTGACCATATTCACGATGATGAAGAGATTTACGAAAGAAATACAAAGGCTTGTGATTTAGATAGACATGTGAGGCTTCAAGATGCCCATGCTCATGAAAATGAACTTGAGGGGGCCACGCATCTGATGGAAGAAAATGAGATGAAAAGGGACGGTAACAAGGTGCTAGAAGAAATTATAGAGACTCAAACTGATCCAATTTATGAAGAGATAAGAGCAGAGGAATCTGGCATCGACACAGAACCCAGTTCCAGCTATGAGCCAGATGAAACTGAGAAGTTGAGCAAAATTCAGGTTTCTAATGCAGTCAATGAAAATGATGAAACTCTTGAAGTACTTCCGGAGTTTTATTCATGTGATCTGCAGGATGATATAATAGTAGCAAGTACTGCGTCAATACAACATCAAGAGAAATACAAAGAGCCAGAATCTGATCAAGAGACTCATGATTTCTGTGAGAAACATACAGGCCAGACTTCTTCCTTTGATCAAGGTGCCCCTGTACTCGGTCAAACAGTGTATCAAGTGAAAAATACATTTGAAACAGTTATCACTGAAGATGATTCTACAAATGTTGGTGAAACTGACATGGTTAGACAAAATCAGGATCAGTGTTTGGAAAAGGCAGAATCTGATTGTGATTTGGCTATGCTTGTTGATGAAACAACTCCCGAGTCTATAGAAATATGTAAGTATGTGAAGGAGGCTAGAGTTGTGTCAGATGAAGAGATCGATGAGAATAGATCTAACTCCTCTAGCGAGGAAATGTTATTTGACAATGAACATGATATAGAAGCATCCCAGATACCTAGTATTTCTGAATGGAAACAAAGTCCTTTCAAAGAAGAGGAGGTTAAATCAATTCACAGAAATATAGAGGAGAGTCATCAAGCATCTATGACAATGGAGGAGAAGAAAGCCAATGGTAAGTCACAAAAGGTGGAGGTGGATAAGGAACTCCTCAAGAAAATTGATGAAGCAAAAAATAGAGAAAGAGAAAAGGAGAAATTAGCTGTAGAAAGAGCTATCCGGGAAGCTCGTGAAAGGGCATTTGCTGATGCAAGAGAAAGGGCAGCTTTGGAGAGAGTTGCATCTGAAGCTCGTCAAAAGAACATTTTGAATGAACGAGAACGGCTAAAAGCCACTAGTCAAGCAACTGAGAAAACACCGGCTGAGAAGGCTGCTATAGAAGCAAAAATTAAAGCTGAACGTGCTGCTGTGGAGAGAGCAACTGCAGAGGCAAGAGCACGTGCCCTGGAGAGGGCACTGTCTGAGAAGGCTGCTTCTGATGCAAAAACTAAATCTAACAAGTCTGTTGCAGAGAAACACGGTGCTTCAAGAGGTAATGGAACAAAGCAACATTCAAAGTCTTTCAGCTATGGAGTTGGTGATTCTACCGAGGTCTTTGATGGAGCTAATGCTGACTCTGCTCAGAGATGTAAAGCTAGGTCTGAGAGGCATCAGAGAATAGGGGAACGTGTGGCAAAGGCTCTTGCAGAAAAGAGTATGCGTGATCGGCTTGTGCAGAAAGAGCAAGAGGAGAGAAATAGGGTAGCTGAAGCTCTCGATGCCGATGTTAAAAGGTGGTCTAGTGGGAAGGCAGGAAACTTGAGAGCATTGCTTTCGACATTACAATATATCCTTGGACCCGATAGCGGCTGGCAACCAATTCCTTTAACAGAAATAGTAACCACACCTGCTGTAAAGAAAGCTTATCGTAAAGCTACTCTTTGTGTGCATCCCGACAAGCTGCAGCAGCGAGGCGCTAGCGTTCAGCAAAAGTACACTTGTGAGAAGGTTTTTGATCTTCTAAAGGAAGCTTGGAACAGATTCAACATGGAAGAAAGGTGA 4020 0.4134 MEFGATTATLTKKHSNSYGVSGRSAYDGVFATPIKLRAQSFSQSDDYNEIFGSSGASSSIPILELPELKERRVMTEDVRHSKLDYSNVFGGFENLDAAVPFEEVVVKPKEKSSFTNGAAKRNKVKSGEQSFREDRTNSSKEIPAVSPSFNGAKRINMSYHKVSQGNENGANGTTHIAQLHAVPAYTRLIEEVNSVKMNGAKSTPAPVAQDTSSGSHCDEGIKEGGHCAKSFVDPSPNNAKKQSSNNGGKDINRSESDSVDLFYDACEISNGSDGIHEVKAHPSQTATANLDINNNNVDASRSTETNCQTSKSGRYESPAGADSPTYLEDTVDSNSAAAASVAALRKAIEEAQVRIKVAKESMRRKKEGYPDRVKQKSSIDLKVREKKEAKLAYKTTKVKEINSRQTFGEMDALMPMRTEKVRSDIGDKETCTANEAVQEAQKKLKLSRAEHKEDVELKEADQKGKDLELKEAGNAKNVPYDRNASVKPDEFDHSVEMVKEYLEQENYKEEASADNEEGSSGELVHETKHRCQEVVGETILIRETLDSGGTDKRLKVNEVENKVTPFDEPNGHVINLGGKPSMTGNKENIAYKPEDGKKAKWSIDPEECQKILRAIQELGKGEKHISQEQKESDDEVELVGGLEECELTESREPTDSEGPCSPDRSELISTDKEIYNSGCLEDKERRNTSDFSDVNQEVEHSYSREATDSTFGDIYVQEILEDIVDHIHDDEEIYERNTKACDLDRHVRLQDAHAHENELEGATHLMEENEMKRDGNKVLEEIIETQTDPIYEEIRAEESGIDTEPSSSYEPDETEKLSKIQVSNAVNENDETLEVLPEFYSCDLQDDIIVASTASIQHQEKYKEPESDQETHDFCEKHTGQTSSFDQGAPVLGQTVYQVKNTFETVITEDDSTNVGETDMVRQNQDQCLEKAESDCDLAMLVDETTPESIEICKYVKEARVVSDEEIDENRSNSSSEEMLFDNEHDIEASQIPSISEWKQSPFKEEEVKSIHRNIEESHQASMTMEEKKANGKSQKVEVDKELLKKIDEAKNREREKEKLAVERAIREARERAFADARERAALERVASEARQKNILNERERLKATSQATEKTPAEKAAIEAKIKAERAAVERATAEARARALERALSEKAASDAKTKSNKSVAEKHGASRGNGTKQHSKSFSYGVGDSTEVFDGANADSAQRCKARSERHQRIGERVAKALAEKSMRDRLVQKEQEERNRVAEALDADVKRWSSGKAGNLRALLSTLQYILGPDSGWQPIPLTEIVTTPAVKKAYRKATLCVHPDKLQQRGASVQQKYTCEKVFDLLKEAWNRFNMEER 1339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00172 1339 MobiDBLite consensus disorder prediction 1146 1164 - -
Trre1g00172 1339 MobiDBLite consensus disorder prediction 110 149 - -
Trre1g00172 1339 MobiDBLite consensus disorder prediction 1017 1040 - -
Trre1g00172 1339 Gene3D DnaJ domain 1211 1339 IPR036869 -
Trre1g00172 1339 MobiDBLite consensus disorder prediction 1095 1116 - -
Trre1g00172 1339 MobiDBLite consensus disorder prediction 235 252 - -
Trre1g00172 1339 MobiDBLite consensus disorder prediction 200 215 - -
Trre1g00172 1339 MobiDBLite consensus disorder prediction 686 705 - -
Trre1g00172 1339 MobiDBLite consensus disorder prediction 125 139 - -
Trre1g00172 1339 MobiDBLite consensus disorder prediction 505 525 - -
Trre1g00172 1339 MobiDBLite consensus disorder prediction 286 325 - -
Trre1g00172 1339 PANTHER AUXILIN/CYCLIN G-ASSOCIATED KINASE-RELATED 17 1339 - -
Trre1g00172 1339 SUPERFAMILY Chaperone J-domain 1199 1335 IPR036869 -
Trre1g00172 1339 MobiDBLite consensus disorder prediction 644 659 - -
Trre1g00172 1339 FunFam Auxilin-related protein 1 1210 1339 - -
Trre1g00172 1339 Coils Coil 341 361 - -
Trre1g00172 1339 Coils Coil 1116 1145 - -
Trre1g00172 1339 ProSiteProfiles dnaJ domain profile. 1275 1339 IPR001623 -
Trre1g00172 1339 MobiDBLite consensus disorder prediction 286 316 - -
Trre1g00172 1339 MobiDBLite consensus disorder prediction 563 602 - -
Trre1g00172 1339 MobiDBLite consensus disorder prediction 200 254 - -
Trre1g00172 1339 MobiDBLite consensus disorder prediction 644 672 - -
Trre1g00172 1339 Coils Coil 1040 1072 - -
Trre1g00172 1339 MobiDBLite consensus disorder prediction 1146 1182 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00172 Trre-Chr1 1292966 1298745 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g00172 1 1292966 1298745 Trre1g00172 1 1292966 1298745 ECH
Trre1g00172 1 1292966 1298745 Trre5g05567 5 56046487 56049610 PCT