Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00166 ATGGAAACTGTAGTGGAAACCCTTCACATGAACAAAGGAGCTGGCGAAACTAGCTATGCCATGAACTCCTTAGCCCAGAAGAAGATAATATCATTGACAAAACAAGCAATAGAGAAAGCTATTAAGGAAATTGTGTGCTCAAAAAGTTGGCCAATAATGAAAATGGGAATTGCTGACTTAGGTTGTTCATCAGGACCTAATGCATTAAGGGCAATTTTAGAAATAGTTGAAGCTATAAATGCAACCTCAAACATGTTGGATCGACCAACACCAAAGGAACTGATGTTGTATCTAAACGACCTTTTCACCAATGATTTCAACAACATTTTTGCTTCATTGCCATCTTTTCACAAAAAAATTAGGCAAGAAAAGAAAAATAATCAAACAAAAAATAATAATGCCAGGTACTTTGCTTCTACTTGTTTTGTTGCCGCCGTACCGGGCACTTTCCACGGTCGACTCTTCCCATCCGAGTCCATCCACTTTCTTCACTCTTCTTCAAGCCTCCATTGGCTTTCTCAGGTTCCTAGTGGTTTAAAGGACGAAAGTGGGAGAGGGTTAAATAAGGGAAAACTCTACATATCAAAAAGCAGTCCCAATTGTGTGCTAGAAGCTTATGCACAACAATTTCAAAATGATTTTTCATGTTTCCTTGAGTCACGTTCTCAAGAGATAGCACATGAGGGACGCATGGTCCTTTCTTTAATGGGTAGAGAATCCATGGACCCAACATCAACCAATGGTTTCTATCAATGGGAACTTTTAGCACAAGCCCTTATGACCATGGTTTCCGAGGGTATTGTTGAAGAAGAAAAAGTGGATTCTTTTAACGCTCCTTACTATGCATGTTGTTATGAAGAATTGAAAATGGTTATTGAAAAGGAAGGTTCATTCATGGTGGATTCCCATGAAACTTATGAAATTGATTGGGATGAAGGGATGGAATTGGAAATTAGAGGAGAAGGTTTTGCTAAGGCTATGAGGGCTGTGGTTGAGTCCATATTAGAATATCATTTTGGTATTCATATAATGGATGACTTGTTTAGAAGGTATGCTCAACTTGTGGATCACCATTTGTCCAATACTAGGGCCAAATTAATCACCTTCATCATTTCTCTAGTCAAGCTACACTAA 1134 0.3854 METVVETLHMNKGAGETSYAMNSLAQKKIISLTKQAIEKAIKEIVCSKSWPIMKMGIADLGCSSGPNALRAILEIVEAINATSNMLDRPTPKELMLYLNDLFTNDFNNIFASLPSFHKKIRQEKKNNQTKNNNARYFASTCFVAAVPGTFHGRLFPSESIHFLHSSSSLHWLSQVPSGLKDESGRGLNKGKLYISKSSPNCVLEAYAQQFQNDFSCFLESRSQEIAHEGRMVLSLMGRESMDPTSTNGFYQWELLAQALMTMVSEGIVEEEKVDSFNAPYYACCYEELKMVIEKEGSFMVDSHETYEIDWDEGMELEIRGEGFAKAMRAVVESILEYHFGIHIMDDLFRRYAQLVDHHLSNTRAKLITFIISLVKLH 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00166 377 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 9 362 IPR005299 GO:0008168
Trre1g00166 377 Pfam SAM dependent carboxyl methyltransferase 40 375 IPR005299 GO:0008168
Trre1g00166 377 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 4 375 IPR029063 -
Trre1g00166 377 Gene3D Vaccinia Virus protein VP39 22 309 IPR029063 -
Trre1g00166 377 Gene3D - 8 362 IPR042086 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00166 Trre-Chr1 1265312 1267323 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g00166 1 1265312 1267323 Trre1g00166 1 1265312 1267323 ECH