Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00159 ATGGCTACATCTAGTGGAAACTCTAGTGTCTTTACAAAATCTCAAAGCTATGGATCTGAGGAAGATTTGCAAGTTCTTATGGATCAAAGAAAAAGGAAGAGAAAACAATCGAATCGCGAATCGGCAAGAAGATCAAGGATGAGGAAGCAGAAACACATGGATGATTTAATGGTTGAGGTGGAAAGACTAAGAAATGTAAACAATGAAATCATGACAAGGATGAACATGACAACACAACACTACCTAAAAATTGAGGCAGAGAATTGTGTTTTAAGGGCACAAATGGTTGAACTTAATCAAAGATAA 306 0.3627 MATSSGNSSVFTKSQSYGSEEDLQVLMDQRKRKRKQSNRESARRSRMRKQKHMDDLMVEVERLRNVNNEIMTRMNMTTQHYLKIEAENCVLRAQMVELNQR 101
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00159 101 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 33 48 IPR004827 GO:0003700|GO:0006355
Trre1g00159 101 Gene3D - 28 84 - -
Trre1g00159 101 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 28 91 IPR004827 GO:0003700|GO:0006355
Trre1g00159 101 PANTHER BZIP TRANSCRIPTION FACTOR 44 13 101 - -
Trre1g00159 101 Pfam bZIP transcription factor 30 85 IPR004827 GO:0003700|GO:0006355
Trre1g00159 101 SMART brlzneu 26 90 IPR004827 GO:0003700|GO:0006355
Trre1g00159 101 MobiDBLite consensus disorder prediction 1 22 - -
Trre1g00159 101 Coils Coil 53 73 - -
Trre1g00159 101 CDD bZIP_plant_GBF1 31 81 IPR045314 GO:0003700|GO:0006355
Trre1g00159 101 MobiDBLite consensus disorder prediction 1 55 - -
Trre1g00159 101 SUPERFAMILY Leucine zipper domain 30 82 IPR046347 GO:0003700|GO:0006355
Trre1g00159 101 FunFam BZIP transcription factor 28 79 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00159 Trre-Chr1 1225410 1225816 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Trre1g00159 bZIP_1 9.5e-10 CL0018