Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00157 ATGGGTGCAGCTTGTTGTGTTGCTGCAAAGGATCAAAGTATTACTAACAGAACTGGAGGTGAAAGTTTGCATAGAGATGTCACACGTTCACCATCATGGAGCTTTCGGTGGGATAGTCTGGGGCGTGTTGCTGATGAAGTTCAGAATCCTTCTTATCCCACATCTCGTGTATTCAGCAGAAATACCAGCATGGAGTTTAAAGGCTCACTAAGTTCTGAAAGAGGTAATTTATCTGATGGGGGAAGCATGTTAGACAATTCCGCGACTATTTCGTTGAAGTCCCCTGTCAGTGAGGCATTGGCTGCAAACGTAATGACACCATCTTCTGATCTGTCCATGTCAAGCAATTTTTCTCCAGTGGTGAAGAATCCAGGAGAATCTTCAATACCAAATCATTCATTTTCAATACCTTCAGTTTTCTCAACACCTATAGCAGGTCCTTTATCTAATCATGGTTATCAACATCTTCCCAATTCTACCCCAACAAGATCTGCAAATCGATCTCTGGGACACCCACTGTTGAGACAAATTTCTGATAATCAGATCATGGGTCTAAAATCACCAGACAGCTCTATTTATGAAGGAAGGGTATCATTTGTACTCTCCACTTGCAGCAACGAAATTGAAGCTATATCCCAATGTGGATCGTCTGATGGTTGGTCGATGCACAACTTTTCTGAGTTGGTGGCCTCCTCACAAAGGGGAAGGTGGTCTTTTGACAGCGAGTGTTTTGGCTCGGGTCGTCGCAAGATAAGTGGATCCAGTAGCAGGCTGTCCTATTCACCTTCCATGGATCTACAATCTTGTGGGACTTGCACAAGGCTTTTGTCTGACAAATCAGCATGGGGCAACCACAAATTTATTGGCAACAGTGACCTCTCAGTTGTTGCCGTACTAATATGTGGTCATGCATTTCATGCAGATTGCTTAGAGACTATGACTGCAGAGGCAGATAAGTATGATCCATCGTGTCCAATTTGTATGGCTGGCGGCGATAAGCACTTTCCGAAGTTTTCAAGAAAAGGTTTTCGAGCTGAAGCAGAGATGAAGGCCAAGAACCACAAGATATCCAGGAATCGTGTAGTTGATAGCTACCTTGATGGTGGTTTTGATGTTTTTGATCGCCAAAAAGATATTGAATTGGGAGGTAAAGTTTCAAAGATGGAGGCTAGCTCCAGTACAAGGAGCTCAAGTGGAAAGCCCTTCTTGAAGAAGCACTTTTCACTTGGGTCAAAGTGGAACCGATCCCTATCTGAGAATGATTCTGCCAGAAAGAAAGGCTTTTGGGCAAGATATAAGAAAGATTGA 1308 0.4343 MGAACCVAAKDQSITNRTGGESLHRDVTRSPSWSFRWDSLGRVADEVQNPSYPTSRVFSRNTSMEFKGSLSSERGNLSDGGSMLDNSATISLKSPVSEALAANVMTPSSDLSMSSNFSPVVKNPGESSIPNHSFSIPSVFSTPIAGPLSNHGYQHLPNSTPTRSANRSLGHPLLRQISDNQIMGLKSPDSSIYEGRVSFVLSTCSNEIEAISQCGSSDGWSMHNFSELVASSQRGRWSFDSECFGSGRRKISGSSSRLSYSPSMDLQSCGTCTRLLSDKSAWGNHKFIGNSDLSVVAVLICGHAFHADCLETMTAEADKYDPSCPICMAGGDKHFPKFSRKGFRAEAEMKAKNHKISRNRVVDSYLDGGFDVFDRQKDIELGGKVSKMEASSSTRSSSGKPFLKKHFSLGSKWNRSLSENDSARKKGFWARYKKD 435
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00157 435 PANTHER EXPRESSED PROTEIN 1 331 - -
Trre1g00157 435 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 254 329 IPR013083 -
Trre1g00157 435 ProSiteProfiles Zinc finger RING-type profile. 269 327 IPR001841 -
Trre1g00157 435 SUPERFAMILY RING/U-box 268 329 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00157 Trre-Chr1 1214399 1216835 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g00157 1 1214399 1216835 Trre1g00157 1 1214399 1216835 ECH