Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00145 ATGGCAGCAGAAGAGGGACAAGTGATCAGTGTTCATACCGTTGAATCATGGAAGGAACAGATCCAGAAGGGAAACGACTCCAAAAAATTGATTGTGGTGGATTTTACTGCTTCATGGTGTGGTCCATGCCGTTTTATTTCACCAATTCTAGCTGATATTGCTAAGAAGACGCCTCAAGCCATCTTCCTCAAGGTGGATGTAGATGAATTAAAGAGTGTTGCTGAGGAATGGTCTGTTGAAGCTATGCCAACCTTCTTGTTCTTGAAAGAAGGTAAGGAAGTGGATAAGGTAGTTGGTGCTAAGAAGGAAGAACTTCAAACTACAGTTACCAAGCATGCAACTGTTGTTGCTACTGCTTGA 360 0.425 MAAEEGQVISVHTVESWKEQIQKGNDSKKLIVVDFTASWCGPCRFISPILADIAKKTPQAIFLKVDVDELKSVAEEWSVEAMPTFLFLKEGKEVDKVVGAKKEELQTTVTKHATVVATA 119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00145 119 PANTHER THIOREDOXIN 8 111 - -
Trre1g00145 119 SUPERFAMILY Thioredoxin-like 5 112 IPR036249 -
Trre1g00145 119 ProSitePatterns Thioredoxin family active site. 32 50 IPR017937 -
Trre1g00145 119 CDD TRX_family 15 109 - -
Trre1g00145 119 PRINTS Thioredoxin family signature 78 89 - -
Trre1g00145 119 PRINTS Thioredoxin family signature 39 48 - -
Trre1g00145 119 PRINTS Thioredoxin family signature 31 39 - -
Trre1g00145 119 Pfam Thioredoxin 10 110 IPR013766 -
Trre1g00145 119 ProSiteProfiles Thioredoxin domain profile. 1 114 IPR013766 -
Trre1g00145 119 FunFam Thioredoxin 7 114 - -
Trre1g00145 119 Gene3D Glutaredoxin 1 118 - -
Trre1g00145 119 PIRSF Thioredoxin 7 114 IPR005746 GO:0015035
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00145 Trre-Chr1 1124301 1126220 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g00145 1 1124301 1126220 Trre1g00145 1 1124301 1126220 ECH
Trre1g00145 1 1124301 1126220 Trre5g05628 5 56427498 56428567 PCT