Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00127 ATGGCGGCAGAAAACACTGGAAAAAACAACCTCGAATCTCGCGGTTTCTGGCCATTTCTCCGCCGTTGGATCCCCACTTCTACCGACCACATCATCAATGCCGAGAAACGCCTCCTTTCTCTTGTCAAGACTCCGTATGTTCAAGAACAGGTGAATATAGGATCTGGTCCACCTGATTCGAGAGTGAGGTGGTTTCGTTCATCTAGTAATGAACCGCGGTTTATTAACACGGTTACTTTCGACAGTAAAGATGATTCTCCTACACTTGTAATGGTTCATGGATATGCTGCATCACAGGGTTTCTTTTTTCGTAATTTTGATGCTCTTGCCTCGCGGTTTAGAGTCGTTGCTATTGATCAACTTGGTTGGGGCGGATCTAGCAGGCCAGACTTTACATGCAAAAGCACTGAAGAAACCGAGGATTGGTTCATTGATTCATTTGAGGAATGGAGGAAAGCCAAAAACCTGAGCAAATTTATACTTCTTGGGCATTCTTTTGGAGGTTATATTGCTTCCAAATATGCGCTTAAGCACCCAGAGCATGTACAACACTTGGTTTTGGTGGGATCTGCTGGATTTTCGTCAGAAACAGAGAGGATTACAAAGTTCTTATCAACATGGCAGGGGTCAATCCTGAACCAAATATGGGAATCCAATTTGACACCTCAGACAATCATCAGAGGTTTAGGTCCTTGGGGTCCTGATCTAGTCCACAGGTATACAAGTGCTAGGTTTATCAAATACTCAACTGGGGAACTGTTGACAGAATCTGAATCGAAATTACTAACTGATTATGTTTATCATACATTAGCAGCCAAAGCTAGCGGTGAGCTGTGCTTAAAATATATTTTTTCATTTGGAGCATTTGCCAAGTCGCCTCTTCTACACAGTGCCTCGGAGTGGAAAGTGCCCACCACTTTCATATATGGTTTCAATGACTGGATGAATTACGAAGGGGCCCAAGAAGCTCGCAAGCATATGAAGGTTCCATGTGAAATCATTCGGGTTCCACAGTCCGGGCATTTTGTGTTCATTGAAAACCCATCTGCCTTCCATTCAGCGGTGTTTTATGCTTGTCGAAGGTTTCTTAGTCCTGATCCCGACAGTGAATCCCTTCCTGAAGGGCTAACATCTTCATAG 1140 0.4386 MAAENTGKNNLESRGFWPFLRRWIPTSTDHIINAEKRLLSLVKTPYVQEQVNIGSGPPDSRVRWFRSSSNEPRFINTVTFDSKDDSPTLVMVHGYAASQGFFFRNFDALASRFRVVAIDQLGWGGSSRPDFTCKSTEETEDWFIDSFEEWRKAKNLSKFILLGHSFGGYIASKYALKHPEHVQHLVLVGSAGFSSETERITKFLSTWQGSILNQIWESNLTPQTIIRGLGPWGPDLVHRYTSARFIKYSTGELLTESESKLLTDYVYHTLAAKASGELCLKYIFSFGAFAKSPLLHSASEWKVPTTFIYGFNDWMNYEGAQEARKHMKVPCEIIRVPQSGHFVFIENPSAFHSAVFYACRRFLSPDPDSESLPEGLTSS 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00127 379 Gene3D alpha/beta hydrolase 73 359 IPR029058 -
Trre1g00127 379 PANTHER RE40534P-RELATED 22 356 - -
Trre1g00127 379 FunFam Probable 1-acylglycerol-3-phosphate O-acyltransferase 73 359 - -
Trre1g00127 379 PRINTS Epoxide hydrolase signature 175 188 IPR000639 GO:0003824
Trre1g00127 379 PRINTS Epoxide hydrolase signature 112 127 IPR000639 GO:0003824
Trre1g00127 379 PRINTS Epoxide hydrolase signature 161 174 IPR000639 GO:0003824
Trre1g00127 379 PRINTS Epoxide hydrolase signature 303 319 IPR000639 GO:0003824
Trre1g00127 379 PRINTS Epoxide hydrolase signature 336 358 IPR000639 GO:0003824
Trre1g00127 379 PRINTS Alpha/beta hydrolase fold signature 112 127 IPR000073 -
Trre1g00127 379 PRINTS Alpha/beta hydrolase fold signature 161 174 IPR000073 -
Trre1g00127 379 PRINTS Alpha/beta hydrolase fold signature 175 188 IPR000073 -
Trre1g00127 379 Pfam alpha/beta hydrolase fold 87 199 IPR000073 -
Trre1g00127 379 SUPERFAMILY alpha/beta-Hydrolases 76 355 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00127 Trre-Chr1 935542 939010 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g00127 1 935542 939010 Trre1g00127 1 935542 939010 ECH
Trre1g00127 1 935542 939010 Trre5g05653 5 56608023 56612866 PCT