Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00122 ATGACCACCACCTACATCTTCTTCCTTCTTCCAATTCTCATAACCACCACCATCACATCTCCGGTAGCTGCCGCCGGTAACGGACAATGGCAGCTACTCCAAAAAAACATCGGCATTGTAGCCATGCACATGCAACTTCTTCACAACGACCGCATTGTCATATTCGACCGTACTGATTTCGGCTTATCAAATCTATCCTTGCCCAACGGAAAGTGTCGTAATGACCCGAGAGAAACCACGGTTAAAATCGATTGCACGGCTCATTCGGTCGAATATGACGTAAAATCTAACACTTTTCGTCCATTGTTCGTTCAAACCGATGTTTGGTGTTCTTCCGGAGCAGTGAATCCCTCTGGAACACTCGTCCAAACCGGTGGCTTTAACGATGGAGACCGCACCGTTCGAACCTTTGAACCTTGTAATGGTTGTGATTGGCGGGAAATTGATGGGGGACTTGCTGCTCGGAGATGGTATGCTACCAATCATATTCTACCGGATGGCCGTCAAATTATCATCGGTGGTAGAAGACAATTCAACTACGAATTTTACCCGAAAAATGACATTGGTGCTAAAAATGTTTATAGCTTGCCATTTTTGGTTCAGACTAATGATGCTGGTGCAGAGAACAATTTGTACCCTTTTGTTTTTCTCAATGTGGATGGCAACCTCTTCATCTTTGCTAACAACAAAGCTATCCTCTTTGATTATACTAAGAATGTAGTGGTGAAAACATTTCCACAAGTGCCAGGTGGGGATCCTAGGAATTATCCAAGCACAGGTTCAGGGGTATTATTGCCATTAAGAAATCTACGATCAAAGTCTTTACAAGCTGAGGTTTTAGTTTGTGGCGGAGCTCCACGCGGATCTTATCAAAAAGCAACAAAGAACGAGTTTGTCGGAGCTTTGAATACTTGTGCCCGAATCAAAATAACTGACCCGAACCCAAAATGGGTCGTGGAGACTATGCCCGGGCCTAGAGTCATGGGTGATATGGTAATGCTTCCGAATTGCGATGTTTTGATTATTAATGGAGGATCTTCAGGGACAGCGGGGTGGGAATATGGGCGAGAGCCGGTTCTAAATCCAGTTATTTACAAACCGAATAATCCAATTGGATCACGGTTTGAATCACAAAATCCATCTAACACGCCCCGAATGTATCATTCTAGTGCTGTTTTGGTTCGTGATGGGAGGGTTCTTGTTGGAGGTAGTAACCCTCACATTGGTTATAGTTTCGCCAATGTGTTGTTTCCAACCGAACTTAGTATTGAAGCTTTTTCTCCTTCTTACCTTGATTCAAGATTTTCAAATGTTCGTCCGAGGATTGTGTCACCTATTTTGGGGGCACAAAAATACGGTCAAAAGTTGGTGGTGCGATTTGAGGTGCAAACAACATTTGATCAAAATTCAGTACGTGTTACGGTGTTGGCGCCACCTTTTAATACACACTCATTCTCCATGAATCAGAGATTGTTGGTGTTGGAGCCGACCAAAGTGGCTAATGTAGCGGGAACAACCTACGAAATTGATGTTACAATGCCCGGTTCACCTATTCTTGCACCTCCCGGTTTTTATATACTATTTGTGGTTCATAAAGATATTCCAAGTGAAGGTGTTTGGATACAAATACGTTGA 1635 0.4343 MTTTYIFFLLPILITTTITSPVAAAGNGQWQLLQKNIGIVAMHMQLLHNDRIVIFDRTDFGLSNLSLPNGKCRNDPRETTVKIDCTAHSVEYDVKSNTFRPLFVQTDVWCSSGAVNPSGTLVQTGGFNDGDRTVRTFEPCNGCDWREIDGGLAARRWYATNHILPDGRQIIIGGRRQFNYEFYPKNDIGAKNVYSLPFLVQTNDAGAENNLYPFVFLNVDGNLFIFANNKAILFDYTKNVVVKTFPQVPGGDPRNYPSTGSGVLLPLRNLRSKSLQAEVLVCGGAPRGSYQKATKNEFVGALNTCARIKITDPNPKWVVETMPGPRVMGDMVMLPNCDVLIINGGSSGTAGWEYGREPVLNPVIYKPNNPIGSRFESQNPSNTPRMYHSSAVLVRDGRVLVGGSNPHIGYSFANVLFPTELSIEAFSPSYLDSRFSNVRPRIVSPILGAQKYGQKLVVRFEVQTTFDQNSVRVTVLAPPFNTHSFSMNQRLLVLEPTKVANVAGTTYEIDVTMPGSPILAPPGFYILFVVHKDIPSEGVWIQIR 544
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00122 544 PANTHER SECRETED PROTEIN-RELATED 21 543 - -
Trre1g00122 544 CDD E_set_GO_C 435 543 IPR015202 -
Trre1g00122 544 Gene3D - 24 435 IPR037293 -
Trre1g00122 544 SUPERFAMILY E set domains 435 543 IPR014756 -
Trre1g00122 544 SUPERFAMILY Galactose oxidase, central domain 90 432 IPR011043 -
Trre1g00122 544 FunFam Aldehyde oxidase GLOX 24 437 - -
Trre1g00122 544 Gene3D Immunoglobulins 438 544 IPR013783 -
Trre1g00122 544 Pfam Glyoxal oxidase N-terminus 42 284 IPR009880 -
Trre1g00122 544 Pfam Galactose oxidase-like, Early set domain 439 543 IPR015202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00122 Trre-Chr1 881150 883549 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g00122 1 881150 883549 Trre1g00122 1 881150 883549 ECH
Trre5g05655 5 56644448 56646362 Trre1g00122 1 881150 883549 PCT