Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00097 ATGGATAGAAGGTGGCCTTGGAAGAAGAAATCATCTGATAAGACTGTGCTTGAGAAAGTTGTTGCTGAATTGGATTCTGCTGGTGCTTCTAATCAGGGAAATCAGGATGTTTATAAGAAGCCGAACTATGTCCAAATCTCTGTAGAGTCATACTCACATCTGACGGGTTTGGAGGATCAAGTGAAGACATATGAAGAAAAGGTTCAGACACTTGAGGATGAGATCACTGAATTAAATGAAAAACTGTCGACGGCAAACTCAGAGATAAATACCAAGGAAGCCTTGGTAAAACAACATGCTAAAGTAGCTGAAGAGGCTGTCTCTGGCTGGGAAAAGGCAGAAGCAGAAGCTTTGGCGTTGAAGAACCATCTAGAATCTGTCACTCTTTTGAAACTTACTGCTGAGGATCAGGCATCACAGTTAGATGGTGCTCTTAAAGAGTGTATGCGACAGATAAGAAACCTGAAGGAAGAACATGAACTGAAAATACAGGACGTTGCCCTCGCAAAAACTAGGCAATTGGACAAGATTAAGGGTGATCTTGAGGCTAGGATACATAACTTTGAACAGGAACTGCTCAGGTCGGCTGCTGATAATGCGGCTCTGTCAAGGTCTTTGCAGGAGCGCTCTAACATGGTAGTCAAAATAAGTGAAGAAAAAGCTCATGCCGAGGCTGAAATTGAGCATCATAAGAGCACCATAGAATCATGTGAAAGAGAAATCAATTCGCTTAAATATGAGCTTCATGTTATTTCCAAAGAGCTTGAAATTCGCAATGAAGAAAAGAACATGAGTATGAGGTCTGCAGAAGCTGCTAACAAGCAGCATATGGAGGGTGTTAAAAAAATTGCTAAATTAGAGGCAGAATGCCAAAGGTTACGTGGTCTAGTACGGAAAAAGTTACCTGGTCCTGCTGCGCTCGCACAAATGAAGCTGGAAGTTGAAAGTCTTGGCCGAGATTATGGAGAAACTCGACTAAGGAAGTCTCCTGTCAAACCTGCTAGTTCTCATTTCTCTCCGTTGCCTGATTTCTCTCTGGAGAATATACAGAAATTCCAGAAAGATAATGAATTTCTTACAGAGCGCTTATTGACAATGGAAGAAGAAACAAAGATGCTGAAAGAAGCTTTGGCAAAACGTAACAGTGAATTGCAGGCTTCAAGGAGTATGTGTGCTAAAACACTTAGCAAACTTCAAATTTTGGAAGCACAAGGCCATACAAGTAATCAGCAGAAGGGATCTCCAAAATCTCCCGTCCATATGAATCATGAAAGCATTTACAGCCAAAATACAGGCTACGCACCAAGCATGATCTCCATATCTGAAGATGGTAACGATGACACGGGAAGTTGTGCAGAGTCTTGGTCCACAGCAATCATCTCTGAGCTATCCCAAATCCCAAAAGAAAAGAATGCCGACGAATTGGGCAAATCTGAAGTGACTAAGAAGTTGGAACTGATGGATGACTTTCTAGAGGTGGAGAAATTTGCTGGATTATCAAACGATTCTAATGAAGATGCCTCTGTGACATTGACTTCAAACAATAAGACGGACGAAATCATGACCAATGATGTGCCAGAAGTCAGTACAAGCAAAGATGTTCCCTCCGAGTCTGAAAATAAGAGTGATTTGAATGCATTGCCAAGTCAAGTGTCTCCTACTGCAGTATCACCCAGTCTCAGTGGGATTGATGGCTTATCAGCGGCAGAGCTTCAATCAAGAATACAATCAGTTTTTGAGTCTACAACTAAGGATACTGATATATGTAAGATCCTAAAGGATATTAAGCATGTTCTTGAAGAAGCACAGGACACGTCCATCCAAAACTCTGTAGCTGTCATTACCCTTGATGCCACACCTTCTGATAGTCCGTGTGATAAAAAGGATAATCCTGAAGATGCCGGTTCAATTGCAGAAAAGGAACTCATTTCATCCCAAGAACCTACTGAATATATGCAGATAACTTCTGATATAGAAGCTGCAATATCTCAAATTCACGACTTTGTATTGTTCCTAGGTGGAGAAGCAATGACAGTTCATGATATATCTTCTGATGGAGATGGGATAAGCCAAAAGATGGAGGAGTTCTCTGTTACTTATAATAAAGTTAAATGCCATGAAGCAAGTTTGATACAATTTGTTCTTGATCTTTCTTGTGTCTTGACTAAAACAAGTGAATTCAGATTTAATATCCTTGGTTATAAGGGTATGGAAACTGAAACTAACAGTCCGGATTGTATAGATAAGATTGCTCTGCCTGAAAATAAGTTAGTTCAAGACAACTCGTCTGGAGAGAGATATCAAAATGGTCATTCCCATATTATTAATCCTTGTTCTAATCCCGAGGTTCCTGATGATGGAAATTTGACCTCAAGCTATGAATCAAATGCCACATCACAAAAGTTCTCCATCGAGGACTTTGAGGAATTGAAATTAGAGAAAGAGAAGGCGATCATGGATCTGTCGAAATGTTCTGAAAATCTTGAAATGACAAAGTTCCAGTTACAAGAGACCGAACAACTTCTAGCTGAAGTTAAATCACAATTGGCTTCTGCTCAAAGGTCAAACAGCTTGGGCGAGACTCAACTAAAATGCATGGCAGAGTCATACAGATCACTTGAAACACGTGCGCAGGAGTTTGAAACTGAGCTCAACCATCTGCGGATGAAGACAGGATCTCTTGAAAATGAACTTAAAGATGAAAAGAGATCTCACGAAGCAGCTTTGGCGAAGTGCAAGGAGTTAGAAGAACAATTGCAAAGGAATGAGATCTCAGCTGCTGATAATGAGCTTAAGACTAAAAAGGAGAGAGACTTGGCTTCTGCTGCTGAAAAGCTAGCTGAGTGTCAGGAAACCATATATCTTCTAGGCAAGCAGCTAAAAGCTATGCATCCTCAAACAGAACCAATGGGATCTGTGTATAGTGAGAGGCTTTCGAAGGTTGAAGGCTTCGCAGAGCGTGAACTTCAGAGCCCAAATTTGCAGGATCTGGATCAGGTGGAGATGGACGGTGCTAGTTTTGCTTTTATGCAAAGACAGGGTGCAGATTCCCCTTTGCATTTTACCAACAGTTTATATAGTCCATCAGATAATGACTTAAACTTTCAAGCCATATCTCCTGTACATCATCCAAGTCACAAGCCAACCAAGTCAACATCTTCATCAGCTTCTTCAACTCCTACACCAGAGAAACATGCCCGAGGTTTCAGTAGATTCTTTTCATCAAAAGGAAAAGCCGGTCATTGA 3246 0.4097 MDRRWPWKKKSSDKTVLEKVVAELDSAGASNQGNQDVYKKPNYVQISVESYSHLTGLEDQVKTYEEKVQTLEDEITELNEKLSTANSEINTKEALVKQHAKVAEEAVSGWEKAEAEALALKNHLESVTLLKLTAEDQASQLDGALKECMRQIRNLKEEHELKIQDVALAKTRQLDKIKGDLEARIHNFEQELLRSAADNAALSRSLQERSNMVVKISEEKAHAEAEIEHHKSTIESCEREINSLKYELHVISKELEIRNEEKNMSMRSAEAANKQHMEGVKKIAKLEAECQRLRGLVRKKLPGPAALAQMKLEVESLGRDYGETRLRKSPVKPASSHFSPLPDFSLENIQKFQKDNEFLTERLLTMEEETKMLKEALAKRNSELQASRSMCAKTLSKLQILEAQGHTSNQQKGSPKSPVHMNHESIYSQNTGYAPSMISISEDGNDDTGSCAESWSTAIISELSQIPKEKNADELGKSEVTKKLELMDDFLEVEKFAGLSNDSNEDASVTLTSNNKTDEIMTNDVPEVSTSKDVPSESENKSDLNALPSQVSPTAVSPSLSGIDGLSAAELQSRIQSVFESTTKDTDICKILKDIKHVLEEAQDTSIQNSVAVITLDATPSDSPCDKKDNPEDAGSIAEKELISSQEPTEYMQITSDIEAAISQIHDFVLFLGGEAMTVHDISSDGDGISQKMEEFSVTYNKVKCHEASLIQFVLDLSCVLTKTSEFRFNILGYKGMETETNSPDCIDKIALPENKLVQDNSSGERYQNGHSHIINPCSNPEVPDDGNLTSSYESNATSQKFSIEDFEELKLEKEKAIMDLSKCSENLEMTKFQLQETEQLLAEVKSQLASAQRSNSLGETQLKCMAESYRSLETRAQEFETELNHLRMKTGSLENELKDEKRSHEAALAKCKELEEQLQRNEISAADNELKTKKERDLASAAEKLAECQETIYLLGKQLKAMHPQTEPMGSVYSERLSKVEGFAERELQSPNLQDLDQVEMDGASFAFMQRQGADSPLHFTNSLYSPSDNDLNFQAISPVHHPSHKPTKSTSSSASSTPTPEKHARGFSRFFSSKGKAGH 1081
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00097 1081 Coils Coil 828 855 - -
Trre1g00097 1081 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 1 1076 - -
Trre1g00097 1081 Coils Coil 54 95 - -
Trre1g00097 1081 Coils Coil 349 376 - -
Trre1g00097 1081 SUPERFAMILY Tropomyosin 810 966 - -
Trre1g00097 1081 Pfam Filament-like plant protein, long coiled-coil 92 970 IPR008587 -
Trre1g00097 1081 MobiDBLite consensus disorder prediction 1045 1064 - -
Trre1g00097 1081 MobiDBLite consensus disorder prediction 540 560 - -
Trre1g00097 1081 MobiDBLite consensus disorder prediction 502 533 - -
Trre1g00097 1081 Coils Coil 220 289 - -
Trre1g00097 1081 Coils Coil 863 952 - -
Trre1g00097 1081 MobiDBLite consensus disorder prediction 502 560 - -
Trre1g00097 1081 Coils Coil 138 165 - -
Trre1g00097 1081 MobiDBLite consensus disorder prediction 1033 1081 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre1g00097 Trre-Chr1 639472 643718 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g00097 1 639472 643718 Trre1g00097 1 639472 643718 ECH
Trre1g00097 1 639472 643718 Trre5g05660 5 56679984 56684015 PCT