Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Trre1g00008 ATGGTGTCGCTTCAACCAGTGACTTGCCCTTCCTCTTCTTCCTGTTTCCTTACTGGCTCTCTTCAGTTTTCTCGCTCCCTCTCCGTAAGCTTTGCCCCAAAACCGAGAAAACATCCTCCCCCTTTCATCTGCAATGCTTCATGGCAAGAGCTTGCTGGAGTTTTAGTATTCTCAGCGATTCCATTCACTGCCGTCAAAGCTATAGCTAATAGTCCGCTAGGGGAGTTGCTTCAGAGGAAAATGGAAGAGACAAAGAAATCTGCTATACAAAACTCCTCTAAATTCAAGGCTGAGGCTAACAAGGCCAGGAAAGAGAGCTTTTGGTATGGAGAAGGTCGGCCTCGTTGGCTCGGTCCTTTTTCATACGGCTACCCATCATATCTCATTGGGGAACTTCCCGGGGATTATGGCTTTGACATTGCTGCCCTTGCCAAGGATCCTGTGGCACTGGACAAATATTTCAACTTTGAGATATTGCATGCTCGCTGGGCTATGCTTGCATCTGTTGGTGCTGTGATTCCCGAGTTGTTAGACCTATTGGGAGCCTTTCACTTTGTAGAACCTGTTTGGTGGCGCGTTGGTTACTCCAAGCTCCAGGGAGATACTCTAGATTATCTTGGCATCCCAGGTCTTCACTTGGCTGGAAGCCAGGGAGTGGTTGTGATTGCTATTTGCCAAGCACTCCTTATGGTCGGACCAGAATACGCTAGATATTGTGGGATTGAGGCATTGGAGCCTCTAGGAATATATCTGCCTGGTGATATAAACTACCCTGGAGGAGCACTGTTTGATCCCTTAAATCTGTCCAAAGATCCTAAAGCTTTTGAAGAGCTAAAGGTGAAAGAAATAAAAAATGGACGCTTGGCAATGATGGCTTGGTTAGGCTTCTTCATGCAAGCAGCACTGACGGGTAAAGGTCCTGTTCAGAACATTATGGATCACATCTCTGATCCTTTCCACAACAACTTGCTGGGGTTACTCAATTCAATGAAATTACACTAG 1002 0.4641 MVSLQPVTCPSSSSCFLTGSLQFSRSLSVSFAPKPRKHPPPFICNASWQELAGVLVFSAIPFTAVKAIANSPLGELLQRKMEETKKSAIQNSSKFKAEANKARKESFWYGEGRPRWLGPFSYGYPSYLIGELPGDYGFDIAALAKDPVALDKYFNFEILHARWAMLASVGAVIPELLDLLGAFHFVEPVWWRVGYSKLQGDTLDYLGIPGLHLAGSQGVVVIAICQALLMVGPEYARYCGIEALEPLGIYLPGDINYPGGALFDPLNLSKDPKAFEELKVKEIKNGRLAMMAWLGFFMQAALTGKGPVQNIMDHISDPFHNNLLGLLNSMKLH 333
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Trre1g00008 333 SUPERFAMILY Chlorophyll a-b binding protein 107 329 - -
Trre1g00008 333 Gene3D Chlorophyll a/b binding protein domain 115 326 - -
Trre1g00008 333 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 82 325 IPR001344 GO:0009765|GO:0016020
Trre1g00008 333 FunFam Chlorophyll a-b binding protein, chloroplastic 115 327 - -
Trre1g00008 333 Pfam Chlorophyll A-B binding protein 125 300 IPR022796 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Trre1g00008 Trre-Chr1 120098 125163 Dispersed/Wgd
       

Event-related genes


Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre1g00008 1 120098 125163 Trre1g00008 1 120098 125163 ECH