Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g04045 ATGAGGAATCCAAGGGCCGACAATGAAGATGGAAACAACAAATTCTCAGATTTGGAAACTACCGTCACCGACAAATATGCAACTACTTCTTCCCCTCTGACTTTGATGCGTTTGATGGGTTTCTTCGTCATTTCTTTCATGCTCTTTTCCGTATTCTTCTCACTCTCTGTTGTTCTTCGAGACCCTCCCTCTGATGCTGCCATCTCATCTACAACTACTCTCTTCCAACAACACACACAATCACAACAACAAGGTTTTGATGGTGATGCATTTGATACTGTTGAGTTGCTAAAGGATAAACTGCTTGGCGGCCTTCTAGCTGATGGATTTGATGAAAAATCTTGTCTCAGCAGGTATCAGTCAGTTATGTTCCACAAAGGATTATCAGGAAAACCACCTTCTTACCTTATTTCTAAATTGAAAAAGTATGAAGCTCGACACAAACAATGTGGACCTTATACCGAATCCTATAACAAAACGGTGAAAGAACTCGGCTCTGGTCAATTTTCCGATTCCTCAGATTGTAAATATGTTGTATGGATTTCATTTAGTGGGTTGGGAAATAGGATATTGACCCTAGCTTCAGCATTTCTTTATGCTATCCTCACAGACCGTGTTTTACTAGTTGACCCTGGAGTGGATATGACTGATCTCTTTTGCGAACCATTTCCGGATGCTTCCTGGTTTGTCCCTCCCGATTTTCCTCTCAACAGTCAATTGAATAATTTCAACCAGGACTCGAATCAGTGTCATGGGAAAATGCTAAAAACTAATTCAATTACAAACTCCACCGTGCCATCTTTTGTTTATCTTCATCTAGCTCATGATTATGATGATCATGACAAGCTTTTCTTCTGTGATGAAGAACAACATTTTCTCCAGAAAGTGCCTTGGTTAATCATGAAAACAGATAATTACTTTGTCCCGTCTCTGTTCTTGATGCCATCTTTTGAGCAGGAACTGAATGATCTCTTCCCAAAGAAGGACAAAGTTTTCCATTTCTTGGGTAGATATCTGTTCCACCCCACAAACAATGTGTGGGGACTTGTTGTGAGATACTATAATGCATATTTAGCTAAAGTTGATGAAAGAATAGGCATACAAATCAGAGTGTTCGACACCGAACCTGGTCCATTTCAACATGTATTGGATCAGATCTTAGCATGCACTTTGAAGGAGAATATTTTGCCTGATGTTAACCGCGGGGAAAATATTGATAGTTCATCAGGAACGCCAAAGTCAAAAGCTGTACTAATGACATCCTTAAACTCGGGTTATTTTGAAAATGTAAGAGACATCTATTGGGAATATCCTACAGTAACAGGAGAAGTGATTGGAATTTACCAGCCAAGCCATGAAGGATATCAACAAACACAGAAGCAGATTCACAACCAAAAAGCTTGGGCAGAAATGTATCTCTTAAGCTTAACTGATGTGTTAGTAACTAGCTCATGGTCTACTTTCGGTTACGTGGCTCAGGGGCTTGGCGGTTTAAAACCATGGATACTCTACAAACCGGAGAATCGAACGGCCCCAAATCCGCCTTGTCGACGTGCAATGTCGATGGAGCCATGTTTCCATGCTCCTCCCTTCTATGACTGTAAGGCTAAGAGAGGAACTGACACTGGTGAACTTGTTCCACATGTTAGGCACTGTGAGGATATGAGTTGGGGCCTTAAGCTTGTAGACAATTAG 1695 0.4094 MRNPRADNEDGNNKFSDLETTVTDKYATTSSPLTLMRLMGFFVISFMLFSVFFSLSVVLRDPPSDAAISSTTTLFQQHTQSQQQGFDGDAFDTVELLKDKLLGGLLADGFDEKSCLSRYQSVMFHKGLSGKPPSYLISKLKKYEARHKQCGPYTESYNKTVKELGSGQFSDSSDCKYVVWISFSGLGNRILTLASAFLYAILTDRVLLVDPGVDMTDLFCEPFPDASWFVPPDFPLNSQLNNFNQDSNQCHGKMLKTNSITNSTVPSFVYLHLAHDYDDHDKLFFCDEEQHFLQKVPWLIMKTDNYFVPSLFLMPSFEQELNDLFPKKDKVFHFLGRYLFHPTNNVWGLVVRYYNAYLAKVDERIGIQIRVFDTEPGPFQHVLDQILACTLKENILPDVNRGENIDSSSGTPKSKAVLMTSLNSGYFENVRDIYWEYPTVTGEVIGIYQPSHEGYQQTQKQIHNQKAWAEMYLLSLTDVLVTSSWSTFGYVAQGLGGLKPWILYKPENRTAPNPPCRRAMSMEPCFHAPPFYDCKAKRGTDTGELVPHVRHCEDMSWGLKLVDN 564
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g04045 564 Gene3D - 172 226 - -
Trre16g04045 564 FunFam Galactoside 2-alpha-L-fucosyltransferase 173 224 - -
Trre16g04045 564 PANTHER FUCOSYLTRANSFERASE 2-RELATED 45 563 IPR004938 GO:0008107|GO:0016020|GO:0042546
Trre16g04045 564 Pfam Xyloglucan fucosyltransferase 98 535 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g04045 Trre-Chr16 45643948 45646305 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g04045 11 562 Xyloglucan Fucosyltransferase1 AT2G03220 61.302 0.0 701
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre16g04045 K13681 - gmx:100803305 863.603