Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre16g01617 ATGGAACCTGGTGGATGTTCAAAAGATAAACAAGTTGAAGAAATAAATTTTGAGGAATATGCAAGAAACATTAGCAATGATATCAAGGAGTTGGAGGAGCTTCACAAGGATCAAGAAATCAATGAAAACAATCTACCAAGTGAAAAAGCCAAAAGAAGAAAGATGAGTAGAGCTATAGATAATATACTAAAGAGGATGGTAAGATTGGTTGATCAGTGTAATATTGAAGGATTTGTTTATGGAATTGTACCTGAAGATGGAAAACCGATAAGTGCGGCATCGGAGAATCTCCGTTATTGGTGGAAGGAGAAGGTGAAGTTTGATAGAAATGGTCCAGCTGCAATAATGAAGTATAAACAAGAAGGTGGTTTTCAAGTTTTTGGTTCAAACGAAAACATGTTCAATAGAGATCATAACTATGTATCTCTAAGAAACTTGCATGATCTTCCAGATACGACATTAGGGCCACTTTTGTCATGTCTTATGCATAGTTGTGATCCACCAGCAAAGAGTTATCCTTTGGAGAATGCTGTTCCTCCACCATGGTGGCCAAAGGGAGATGAAGAATGGTGGACTCAACTGGATTTTAAAAATGATTTGGGTCCTCCACCTTACAAGAAGACTCATTATCTAAAAAAGGTTTGGAAAGTGGCTGTTCTTGTAAGTATCATTAAGCACATCTCTAATATACCAAAGATTAGAAACATTGTGCACCAAAATAAGAACCTTCAAGACAAACTGTCTGCTAAAGATGCTGCTATTTTATCTGCTATTCTAAATCATGAAGAATTCTTAGAGAAAGAGAAGAATCATCCACATGAGTTACCACCACCAAATGGAAGTAATGAATTTCCTGATATGTTTCATGAAACTCATGATTATGATGTTGAAGGTATTAATGATGGAGGAATAGGTACTTCAAGTATTAATGTACCTAATGATGTTGATGTGGTTTCATTTGATGCAAATGTTAAAGGAAAAAACAATGTTGTTTCTAACAACCTACCTCAATGTGTCAATATGGTTTTTGATGCAAATGTTCATGAAACCAACATGGTTATTAACAATAACCTACCTCATCAATCTGTGGATTTGGTTCCATCTATGGCAAATGTTCAAGGAATCAACATGGCTAATAATAATCTACCTGAATATCCTAATTTGGTTCCTATTGATGAATATGTTCCAAGAAATGACAAAGTTATTAGGCCAATTGCTACAAAAAGAGCTAAATTTAGAATTGATGGGAGTTATACATGTGATAGTCCTCAATGCCCTTATCATGATGACCAATTTGGGTTTGAAACCATGGAATTAAGAGATTATCATCAAGTGAATTGTAGTTATAGAAGCAACTATTTCCATGATCAAGGAAACATCATTGGAGGTTCTTCAAATCAAGGAAACAACAGCATTGGGAGTTCTTCAAGTGGGAACCCAAACAAGTGA 1449 0.3527 MEPGGCSKDKQVEEINFEEYARNISNDIKELEELHKDQEINENNLPSEKAKRRKMSRAIDNILKRMVRLVDQCNIEGFVYGIVPEDGKPISAASENLRYWWKEKVKFDRNGPAAIMKYKQEGGFQVFGSNENMFNRDHNYVSLRNLHDLPDTTLGPLLSCLMHSCDPPAKSYPLENAVPPPWWPKGDEEWWTQLDFKNDLGPPPYKKTHYLKKVWKVAVLVSIIKHISNIPKIRNIVHQNKNLQDKLSAKDAAILSAILNHEEFLEKEKNHPHELPPPNGSNEFPDMFHETHDYDVEGINDGGIGTSSINVPNDVDVVSFDANVKGKNNVVSNNLPQCVNMVFDANVHETNMVINNNLPHQSVDLVPSMANVQGINMANNNLPEYPNLVPIDEYVPRNDKVIRPIATKRAKFRIDGSYTCDSPQCPYHDDQFGFETMELRDYHQVNCSYRSNYFHDQGNIIGGSSNQGNNSIGSSSSGNPNK 482
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre16g01617 482 Pfam Ethylene insensitive 3 31 263 IPR047091 GO:0003700
Trre16g01617 482 Gene3D - 141 273 IPR023278 GO:0003700|GO:0005634
Trre16g01617 482 SUPERFAMILY DNA-binding domain of EIN3-like 145 265 IPR023278 GO:0003700|GO:0005634
Trre16g01617 482 PANTHER ETHYLENE INSENSITIVE 3-LIKE 2 PROTEIN 8 456 IPR006957 GO:0003700|GO:0005634
Trre16g01617 482 Coils Coil 21 41 - -
Trre16g01617 482 MobiDBLite consensus disorder prediction 460 482 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre16g01617 Trre-Chr16 12944639 12947301 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre16g01617 13 299 EIL Transcription Factor Family AT2G27050 46.844 2.64e-83 266
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF EIL Trre16g01617 EIN3 3.1e-84 No_clan