Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04231 ATGAGGAATCCAAGGGCTGACAATGAAGATGGAAACAACAAGTTCTCAGATTTGGAAACTACCGTCACCGACAAATATGTAACTACTTGTTCTTCCCCTCTGACTTTGATCCGTTTGATGGGTTTCTTCGTCATTTCTTTCATGCTCTTCTCCGTATTCTTCTCACTCTCCGTTGTTCTTCGAGACCCTCCCTCTGATGCTGCCATCTCATCTACAACTACTCTCTTCCAACAACACACACTATTACAACAACAAGGTTTTGATGGTGATGCATCTGATTCTGTTGAGTTGCTAAATGATAAACTGCTTGGCGGCGTTCTAACTGATGGATTCGATGAAAAATCTTGTCTCAGCAGGTATCAGTCAGTTATGTTCCACAAAGGACTATCAGGAAAACCTTCTTCTTACCTTATTTCTAAATTGAAAAAGTATGAAGCTCGACACAAACAATGTGGACCTTATACTGAATCCTATAACAAAACGGTGAAAGAACTCGGCTCTGGTCAATTTTCCGATTCCTTGGATTGTAAATATGTTGTATGGATTTCATTTAGTGGGTTGGGAAATAGGATATTGACCCTAGCTTCATCATTTCTTTATGCTCTCCTCACAGACCGTGTTTTACTAGTAGACCCTGGAGTGGACATGATTGATCTCTTTTGCGAACCATTTCCGGATGCTTCCTGGTTTGTCCCTCCCGATTTTCCTCTCAACAGTCAATTGAATAATTTCAACCAGGACTCGAATCAGTGTCATGGGAAAATGCTGAAAACAAATCCAATTACAAACTCCACCGTGCTATCTTTTGTTTATCTTCATCTAGCTCATGATTACGATGATCATGACAAGCTTTTCTTCTGCGATGAAGAGCAACATTTTCTCCAGAAAGTACCGTGGTTAATCATGAAAACAGATAATTACTTTGTCCCGTCTCTGTTCTTGATGCCATCTTTTGAGCAGGAACTGAATGATCTCTTCCCAAAGAAGGACAAAGTTTTCCATTTCTTGGGTAGATATCTGTTCCACCCCACAAACAATGTGTGGGGACTTGTTGTGAGATACTATAATGCATATTTAGCTAAAGTTGATGAAAGAGTAGGCATACAAATCAGAGTGTTCGACACCGAACCTGGTCCATTTCAACATGTATTGCATCAGATAATAGCATGCACTTTCAAGGAGAATATTTTGCCTGATGTTAACCGCGGGGAGAATATTGATAGTTCATCAGGAACACCAAAGTCAAAAGCTGTACTTATGACATCCTTAAGCTCGGGTTATTTTGAAAATGTAAGAGACATCTATTGGGAATATCCTACAGTAACAGGAGAAGTGATCGGAATTTACCAGCCAAGTCATGAAGGATATCAACAAACACAGAAGCAGATTCACAACCAAAAAGCTTGGGCAGAAATGTATCTCTTAAGCTTAACCGATGTGTTAGTAACTAGCTCATGGTCTACTTTCGGTTACGTGGCTCAGGGGCTTGGAGGTTTAAAACCATGGATACTCTACAAACCAGAGAATCGAACGGCCCCAAATCCGCCTTGTCGACGTGCGATGTCGATGGAGCCATGTTTCCATGCTCCTCCCTTCTATGACTGTAAGGCTAAGAGAGGAACTGATACTGGTGAACTTGTTCCACATGTCAGGCACTGTGAGGATATGAGTTGGGGCCTTAAGCTTGTAGACAATTAG 1698 0.4117 MRNPRADNEDGNNKFSDLETTVTDKYVTTCSSPLTLIRLMGFFVISFMLFSVFFSLSVVLRDPPSDAAISSTTTLFQQHTLLQQQGFDGDASDSVELLNDKLLGGVLTDGFDEKSCLSRYQSVMFHKGLSGKPSSYLISKLKKYEARHKQCGPYTESYNKTVKELGSGQFSDSLDCKYVVWISFSGLGNRILTLASSFLYALLTDRVLLVDPGVDMIDLFCEPFPDASWFVPPDFPLNSQLNNFNQDSNQCHGKMLKTNPITNSTVLSFVYLHLAHDYDDHDKLFFCDEEQHFLQKVPWLIMKTDNYFVPSLFLMPSFEQELNDLFPKKDKVFHFLGRYLFHPTNNVWGLVVRYYNAYLAKVDERVGIQIRVFDTEPGPFQHVLHQIIACTFKENILPDVNRGENIDSSSGTPKSKAVLMTSLSSGYFENVRDIYWEYPTVTGEVIGIYQPSHEGYQQTQKQIHNQKAWAEMYLLSLTDVLVTSSWSTFGYVAQGLGGLKPWILYKPENRTAPNPPCRRAMSMEPCFHAPPFYDCKAKRGTDTGELVPHVRHCEDMSWGLKLVDN 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g04231 565 PANTHER FUCOSYLTRANSFERASE 2-RELATED 48 564 IPR004938 GO:0008107|GO:0016020|GO:0042546
Trre15g04231 565 Gene3D - 174 223 - -
Trre15g04231 565 FunFam Galactoside 2-alpha-L-fucosyltransferase 174 225 - -
Trre15g04231 565 Pfam Xyloglucan fucosyltransferase 98 536 IPR004938 GO:0008107|GO:0016020|GO:0042546
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g04231 Trre-Chr15 52992180 52994505 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g04231 11 563 Xyloglucan Fucosyltransferase1 AT2G03220 60.759 0.0 694
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g04231 K13681 - gmx:100803305 869.766