Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g04230 ATGATGATGAAAAGAATCATTGCAATGAGGAATCCAAGGGCTGACAATGAAGATGGAAACAACAAGTTCTCAGATTTGGAAACTACCGTCACCGACAAATATGTAACTACTTGTTCTTCCCCTCTGACTTTGATCCGTTTGATGGGTTTCTTCGTCATTTCTTTCATGCTCTTCTCCGTATTCTTCTCACTCTCCGTTGTTCTTCGAGACCCTCCCTCTGATGCTGCCATCTCATCTACAACTACTCTCTTCCAACAACACACACTATTACAACAACAAGGTTTTGATGGTGATGCATCTGATTCTGTTGAGTTGCTAAATGATAAACTGCTTGGCGGCGTTCTAACTGATGGATTCGATGAAAAATCTTGTCTCAGCAGGTATCAGTCAGTTATGTTCCACAAAGGACTATCAGGAAAACCTTCTTCTTACCTTATTTCTAAATTGAAAAAGTATGAAGCTCGACACAAACAATGTGGACCTTATACTGAATCCTATAACAAAACGGTGAAAGAACTCGGCTCTGGTCAATTTTCCGATTCCTTGGATTGTAAATATGTTGTATGGATTTCATTTAGTGGGTTGGGAAATAGGATATTGACCCTAGCTTCATCATTTCTTTATGCTCTCCTCACAGACCGTGTTTTACTAGTAGACCCTGGAGTGGACATGATTGATCTCTTTTGCGAACCATTTCCGGATGCTTCCTGGTTTGTCCCTCCCGATTTTCCTCTCAACAGTCAATTGAATAATTTCAACCAGGACTCGAATCAGTGTCATGGGAAAATGCTGAAAACAAATCCAATTACAAACTCCACCGTGCTATCTTTTGTTTATCTTCATCTAGCTCATGATTACGATGATCATGACAAGCTTTTCTTCTGCGATGAAGAGCAACATTTTCTCCAGAAAGTACCGTGGTTAATCATGAAAACAGATAATTACTTTGTCCCGTCTCTGTTCTTGATGCCATCTTTTGAGCAGGAACTGAATGATCTCTTCCCAAAGAAGGACAAAGTTTTCCATTTCTTGGGTAGATATCTGTTCCACCCCACAAACAATGTGTGGGGACTTGTTGTGAGATACTATAATGCATATTTAGCTAAAGTTGATGAAAGAGTAGGCATACAAATCAGAGTGTTCGACACCGAACCTGGTCCATTTCAACATGTATTGCATCAGATAATAGCATGCACTTTCAAGGAGAATATTTTGCCTGATGTTAACCGCGGGGAGAATATTGATAGTTCATCAGGAACACCAAAGTCAAAAGCTGTACTTATGACATCCTTAAGCTCGGGTTATTTTGAAAATGTAAGAGACATCTATTGGGAATATCCTACAGTAACAGGAGAAGTGATCGGAATTTACCAGCCAAGTCATGAAGGATATCAACAAACACAGAAGCAGATTCACAACCAAAAAGCTTGGGCAGAAATGTATCTCTTAAGCTTAACCGATGTGTTAGTAACTAGCTCATGGTCTACTTTCGGTTACGTGGCTCAGGGGCTTGGAGGTTTAAAACCATGGATACTCTACAAACCAGAGAATCGAACGGCCCCAAATCCGCCTTGTCGACGTGCGATGTCGATGGAGCCATGTTTCCATGCTCCTCCCTTCTATGACTGTAAGGCTAAGAGAGGAACTGATACTGGTGAACTTGTTCCACATGTCAGGCACTGTGAGGATATGAGTTGGGGCCTTAAGCTTGTAGACAATTAG 1722 0.41 MMMKRIIAMRNPRADNEDGNNKFSDLETTVTDKYVTTCSSPLTLIRLMGFFVISFMLFSVFFSLSVVLRDPPSDAAISSTTTLFQQHTLLQQQGFDGDASDSVELLNDKLLGGVLTDGFDEKSCLSRYQSVMFHKGLSGKPSSYLISKLKKYEARHKQCGPYTESYNKTVKELGSGQFSDSLDCKYVVWISFSGLGNRILTLASSFLYALLTDRVLLVDPGVDMIDLFCEPFPDASWFVPPDFPLNSQLNNFNQDSNQCHGKMLKTNPITNSTVLSFVYLHLAHDYDDHDKLFFCDEEQHFLQKVPWLIMKTDNYFVPSLFLMPSFEQELNDLFPKKDKVFHFLGRYLFHPTNNVWGLVVRYYNAYLAKVDERVGIQIRVFDTEPGPFQHVLHQIIACTFKENILPDVNRGENIDSSSGTPKSKAVLMTSLSSGYFENVRDIYWEYPTVTGEVIGIYQPSHEGYQQTQKQIHNQKAWAEMYLLSLTDVLVTSSWSTFGYVAQGLGGLKPWILYKPENRTAPNPPCRRAMSMEPCFHAPPFYDCKAKRGTDTGELVPHVRHCEDMSWGLKLVDN 573
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g04230 573 PANTHER FUCOSYLTRANSFERASE 2-RELATED 56 572 IPR004938 GO:0008107|GO:0016020|GO:0042546
Trre15g04230 573 Pfam Xyloglucan fucosyltransferase 106 544 IPR004938 GO:0008107|GO:0016020|GO:0042546
Trre15g04230 573 Gene3D - 182 231 - -
Trre15g04230 573 FunFam Galactoside 2-alpha-L-fucosyltransferase 182 233 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g04230 Trre-Chr15 52992180 52994529 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g04230 19 571 Xyloglucan Fucosyltransferase1 AT2G03220 60.759 0.0 693
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trre15g04230 K13681 - gmx:100803305 869.766
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g04230 15 52992180 52994529 Trre15g04230 15 52992180 52994529 ECH