Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01735 ATGACTGTGGAGACTCATCATCTTAACCTTTTCCCTTCTCAACTCCTACCCAATAACAGAGACATGAACATTCACTCCAACGACACAACCTTCATCAACATGTACAATAATTACTCTTCACTACTTCCACTTTCCGGCACCACCACCGTGTCGGAGAATCTTATTCCGACGCAACCACCGCCGTACAATCCTTTCATAAGTGATCACTTTCTTCAGAAAATCTCCACAATGAAATCCGAAAGCACCCTCACTTACAACAACAACAACAACACAAACAACAACGTTGTCTCGTTCCCGCGAAAACGTTCTAGAAACTCAATCAATAACTACCCATTCGGTGAAGATCTTTCTCAAAACATCAACCACCAAAACACCGACATCGACAACATCATTTCTCAACATATGGAGAAAGTGAGAGTTGAATTGGAAGAAAAGAGAAAAAGACAAACAAGAATGTTAATAGAAGCAATGATGAAAAGGTTAAAAGCTAAAGAAGAAGAAATAGAAAAAATAGAAATAATGAACATGATGCTTGAAGAAAGAGCAAAATCACTATGCATGGAAAATCAAATATGGAGAGAAATAGCACAAAGCAAAGAAGCAACAGCCAATGCACTCCGAAACAATCTCGAACAAGTCCTTACACAGATGGCAAACAGCGGCGGCGGTGAAGATACCCCAATGGCGCCGGAGGAAGACGCGGAGTCATGTTGCGGAAGTAATGAAGAAGATTTTGGGTGGCGCACGGTAGCAGATGATGCGCAGGATAAGGATAATGGAGAAGGTACTAGTGGTGGTAGAGTGAAGATAAATGAAGGTAGCAGTGAAAAGAAGAGATTGTGCAGGAATTGTGGGAAAGGAGAATCGTCCGTACTGATTTTGCCTTGCAGACATCTCTGTCTATGTACTATGTGTGGGGATACGGTTCATACATGTCCTATCTGTAAATCCTTCAAAAATGCTAGTTATCGTGTTAACTTTAGTTAA 987 0.4103 MTVETHHLNLFPSQLLPNNRDMNIHSNDTTFINMYNNYSSLLPLSGTTTVSENLIPTQPPPYNPFISDHFLQKISTMKSESTLTYNNNNNTNNNVVSFPRKRSRNSINNYPFGEDLSQNINHQNTDIDNIISQHMEKVRVELEEKRKRQTRMLIEAMMKRLKAKEEEIEKIEIMNMMLEERAKSLCMENQIWREIAQSKEATANALRNNLEQVLTQMANSGGGEDTPMAPEEDAESCCGSNEEDFGWRTVADDAQDKDNGEGTSGGRVKINEGSSEKKRLCRNCGKGESSVLILPCRHLCLCTMCGDTVHTCPICKSFKNASYRVNFS 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01735 328 Coils Coil 196 216 - -
Trre15g01735 328 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 258 326 IPR013083 -
Trre15g01735 328 Coils Coil 147 181 - -
Trre15g01735 328 CDD mRING-HC-C3HC5_CGRF1-like 279 316 - -
Trre15g01735 328 Pfam Zinc finger, C3HC4 type (RING finger) 278 317 - -
Trre15g01735 328 ProSiteProfiles Zinc finger RING-type profile. 281 316 IPR001841 -
Trre15g01735 328 PANTHER SBP (S-RIBONUCLEASE BINDING PROTEIN) FAMILY PROTEIN 78 324 IPR017066 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01735 Trre-Chr15 13888206 13889394 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g01735 280 317 Miscellaneous Gene Families AT4G39050 39.474 8.07e-07 48.9
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g01735 15 13888206 13889394 Trre15g01735 15 13888206 13889394 ECH