Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01732 ATGAAGAAAATCAATCTATTACTAAGAAAGTGCAAGAGTTTGTCAAGCAAATTAGGAAGATCATCATCTTATAGTAGCTTAAGGTCAAAATCAACTAGAGAAGATATATATGAAATTCAACAAGATGAAAATTGTGAAACTATATTTGTTGGTAGGACAAGGAAAAGGTATGTGATAAGTTCAAAGTATTTGAATCATCCTCTTCTTAACACATTGATCAACAAAAGTAAGCAAAAAGGTTGTGATTATGATAATAATGTTTTGATTGTTAATTGTGAGATTGTTCTTTTTGATCATTTATTATGGATGCTAGAAAATGCAGATCCTATGTTTAGTTCTGAGTCTTTGGAGGAATTAGCTGAACTTTATGTGTTATAA 378 0.291 MKKINLLLRKCKSLSSKLGRSSSYSSLRSKSTREDIYEIQQDENCETIFVGRTRKRYVISSKYLNHPLLNTLINKSKQKGCDYDNNVLIVNCEIVLFDHLLWMLENADPMFSSESLEELAELYVL 125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01732 125 PANTHER EXPRESSED PROTEIN 5 124 - -
Trre15g01732 125 Pfam Auxin responsive protein 11 104 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01732 Trre-Chr15 13864073 13864450 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g01732 47 106 Calmodulin-binding Proteins AT3G43120 31.148 3.02e-06 42.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g01732 15 13864073 13864450 Trre15g01732 15 13864073 13864450 ECH