Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01730 ATGGATTTCTCTACTGTTGCTGGGGCTGATTCTCTTGCTGCTCCAAACACCCAAGATCTTAATCTTTTGGAAAATGTTTCCAAAGATGGTGCATTATTTGATGCATCACAATATGCATTCTTTGGTAAAGATGTTGCTGAGGAAGTTGAGCTGGGGGGGTTAGATGATGATAAAGATTATACCCCTTCTTTTGAGTTTAACGAGGAGGAGTTTTTTCACAATGTAGAAGAGGCGGGTGATGTAAAATCTCCTTTTGATGTTGATGATCTCACTACCACTTTTTTGAAGCTGAACAAAATTGTTAGTGGACCAAAAAGTCCCGGAGTTATTGGTGATCGGCTGTCAAGAGAAAATTCCTCTGCTTCGGAATGGTCACAGAGGGATGATTTTTCCTACTGGGCTGACCATCACACTTATGACAGCGAAGGTTCTCAGGATGCTAAAAGATGGTCATCACATCCACATTCTTCTGTCACTCATCTACCAGAGTCAAAGCCCTTATACAGAACATCATCATTTCCTGAGCAGCAACGGCAGCTGCAACCCCAACTCCAGCATCGCTCTAGTGAACCTGTCCCTAGCTGGTTTGATCAGCAGTTTTATGATATTGAAACTGCTGCTGATGATAATAGATGGTCATCGCATCCACATTCCTCCATTTCCAACATAGAAAGACCGAAGCCCTTGTACAGAACATTATCTCATCCTGACAAGCGACAAGAGCTTCCTCGTTTTTCGAGTGAGCCAACTTTTGGCCCAAAATCTTCATTTACTTCTTATCCTCCCCCTGGAGGTAGGTCTCAACAATCTGCTCTTAATCACAGTACAGGCCAGTTGAACATTCCTTTTGCTGGGGGAGCTCACATGACATTGCCATCACAAAATAACTCTCATTTATTCAGTTCTGCATTACACCTGGGTGGATCAAAATATGAGCCACACTTTAGTGGCAATTTGGCCCAATTTAATACCAGTTCTCCCCTCAATAATCGAATCCAGAATCAATGGGTCAATCAAGCAGGGTTGTATCCCGGAGATAACTCAAGCCTGCTGAATATGTTGCAGCAACAACTATACCATAATAATGGATCAGTGTCTCCCCACATACTGAGTCAGTTGCAGCAACAGCAGCACAGATTGCATCATCCTGTTCAGCAGTCAGCAGGCCTAATATCAGGGTTACAGCCTCATGTATTTAATCACCGTTTTTCGTCTGGATCATCATCTAACGGTAAAAAATATGAACATGTGCTTGGTCTTGGTGATGTTAGAGAGCACAGACAAAAATCAACTCGCAGACATAGGTCCTCTCAACAGGCTTCTAATGCTACTAGCCAGAAGATCGATAGCGGTACATTACAGTTCAGGTCCAAGTATATGACCAGCGATGAAATTGAAAGTATTCTTAAAATGCAGGTTGCTGCTGTGACTCATTGTAATGACCCCTACATTGATGACTATTATCACCAAGCTCGTCTTGCAAAACAACCTTCTGGGGTTAAATTTAAACTTTCATTTTGCCCGACCAAAATAAAGGATCTTTCCTCACGAGCCCGTGCCAATACTGAGGCACACAGTTTTCTTCAGGTTGACGCTTTAGGGAGGGTTTCATATGTGCCCATTCGTCAGCCTCGCCCTCTTCTTGAAGTTGATCCTCCAAACTCCTCTGCTAGTGGTGGCTCTGAGCGAATTATTTCAGAGAAGTCCCTTGAGCAGGAGCCTTTGTTTGCAGCCAGAATCACAATTGAGGATGGTCTCTGTCTTCTTCTCGATGTAGATGATATTGATCGATTCCTAAAGTGCAATCTGCTACAAGATGGTGGAACTCAATTCTTACGAAGAAGGAAGGTCCTTTTGGAGGGATTAGCTACATCACTTCATCTTGTGGACCCACTGGGAAAGAATGGACACAAAGCTGGGCTTGCTGCTAAGGATGACCTTGTTTTCATACAATTGGCATCTCTTTCGAAGGGACGGGAGCTCCTAGCGAAGTATCTTCGGCTGCTTGTTCCTGGTAGTGAGCTTATGCGGATTGGATGCATGGCTATATTTCGTCATTTAAGATTCTTATTTGGTAGTATTCCCTCTGATTCAGCAGTAGCAGAGACTACAAGTGATCTTGCTATGGTTGTTTGTCAGTGTGTCCAAGGAATGGATCTTGGTTCTCTTGGTGCTTGTCTTGCAGCAGTGGTTTGTTCATCAGAGCAGCCTCCTCTGCGTCCCCTTGGAAGCCCTGCTGGAGATAGTGCTTCCCTTGTTTTAGTATCTGTTCTTGAAAGTGCTACTGAACTTCTAACTCATCCACAAGCTGCTTCTAACAGTAAATTGGGCAATCGAACATTTTGGCAGGCCTCATTTGATGAATTTTTTGACCTCCTTACAAAGTATTGCATGAATAAGTACCAGAATATCATGCAATCCCTGGCTATACAAGGGGAACAAAATGTTGCTGCGCTTGGATCTGATGCTGCTAAAGCAGTTAGTATGGAAATGCCCGTCGAGCTCTTACGTGCAAGTCTTCCTCACACCAATGACCGCCAGAGAAAGTTATTACTAGATTTTGCTCAGCGCTCTGCGCCTGTGGTTGGATTTAACAGCTATGGTGGGAGCAGTAGTAGTCATGTGAACTCGGAGACGGTGCTTAGTTGA 2649 0.4387 MDFSTVAGADSLAAPNTQDLNLLENVSKDGALFDASQYAFFGKDVAEEVELGGLDDDKDYTPSFEFNEEEFFHNVEEAGDVKSPFDVDDLTTTFLKLNKIVSGPKSPGVIGDRLSRENSSASEWSQRDDFSYWADHHTYDSEGSQDAKRWSSHPHSSVTHLPESKPLYRTSSFPEQQRQLQPQLQHRSSEPVPSWFDQQFYDIETAADDNRWSSHPHSSISNIERPKPLYRTLSHPDKRQELPRFSSEPTFGPKSSFTSYPPPGGRSQQSALNHSTGQLNIPFAGGAHMTLPSQNNSHLFSSALHLGGSKYEPHFSGNLAQFNTSSPLNNRIQNQWVNQAGLYPGDNSSLLNMLQQQLYHNNGSVSPHILSQLQQQQHRLHHPVQQSAGLISGLQPHVFNHRFSSGSSSNGKKYEHVLGLGDVREHRQKSTRRHRSSQQASNATSQKIDSGTLQFRSKYMTSDEIESILKMQVAAVTHCNDPYIDDYYHQARLAKQPSGVKFKLSFCPTKIKDLSSRARANTEAHSFLQVDALGRVSYVPIRQPRPLLEVDPPNSSASGGSERIISEKSLEQEPLFAARITIEDGLCLLLDVDDIDRFLKCNLLQDGGTQFLRRRKVLLEGLATSLHLVDPLGKNGHKAGLAAKDDLVFIQLASLSKGRELLAKYLRLLVPGSELMRIGCMAIFRHLRFLFGSIPSDSAVAETTSDLAMVVCQCVQGMDLGSLGACLAAVVCSSEQPPLRPLGSPAGDSASLVLVSVLESATELLTHPQAASNSKLGNRTFWQASFDEFFDLLTKYCMNKYQNIMQSLAIQGEQNVAALGSDAAKAVSMEMPVELLRASLPHTNDRQRKLLLDFAQRSAPVVGFNSYGGSSSSHVNSETVLS 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01730 882 MobiDBLite consensus disorder prediction 249 272 - -
Trre15g01730 882 MobiDBLite consensus disorder prediction 230 244 - -
Trre15g01730 882 MobiDBLite consensus disorder prediction 209 272 - -
Trre15g01730 882 MobiDBLite consensus disorder prediction 425 448 - -
Trre15g01730 882 PANTHER TOPOISOMERASE II-ASSOCIATED PROTEIN PAT1 194 864 IPR039900 GO:0000290
Trre15g01730 882 MobiDBLite consensus disorder prediction 143 190 - -
Trre15g01730 882 MobiDBLite consensus disorder prediction 150 190 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01730 Trre-Chr15 13831713 13843488 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g01730 15 13831713 13843488 Trre15g01730 15 13831713 13843488 ECH