Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01715 ATGCTTCATCTCCGTCACCGTCGAGATTCTACTCCGGCTACCACCAAATGGCGTAACAAGTTTGATGAGAATCTTGAGCAGTGGCCACACCTCAATGAGCTTGTTCATTGCTACACTACGGATTGGGTTAAGGATGAGAACAAATACGGTCATTATGAAAGTATTGGAACGCCGTCGTTTCAGAATCAGATATATGAGGGACCTGACACTGACATTGAGACTGAAATGCGGCTTGCTGGTGCAAGACGAACGAAAGGTGAAGACATTAGTGAGGATGACATCCCTAGTACTTCAGGAAGGCAGTTCATGGAAAATGCAGATGGTGAACATTCGGATGTTTCAAAGCATTTTGGTCAATCTCCCCTTCCTGCGTATGAGCCGGCATTTGATTGGGAAAATGAGAGGTCATTGATATTTGGGCAAAGGATACCGGAAACTCCTATATCACATGGAATGAAGATATCTGTAAAGGTTCAGTCTTTACAATTTCAGGCAGGATTGTCCGAGCCCTTTTACGGTACCATTTGCTTATACAATAGGGAGAGAAGAGAGAAATTATCGGAAGACTTTTACTTTCACATCATACCAACCGAAATACAGGATGCCAGAATTACCTGTGATCCTCGCACAATTTTTTACTTAGACGCGCCGTCTGCTTCAGTTTGTCTGTTAATCCAGTTGGAGAAGCATGCTACCGAAGAAGGCGGAGTTACTCCTTCTGTTTATTCTCGTAAAGATACTGCACATTTGACTGAGAGAGAGAAGCAAAAATTACAGGTGTGGTCTAAAATCATGCCGTACAAAGAGTCCTTCGCATGGGCCATTGTGTCATTATTTGATGGCAGTATTGGTGCAGCTTCGGTAGGGCCTGGTTCCCCAAGCAGCCCTCTTGCTCCCAGTGTATCTGGTTCAAGTTCGCATGAAGGTGTTTTTGAGACTAGTACCAAAGTCTCTTTAGATGGAAAGCTGAATTACTCAAATGGAAATTCTGTTGTGGTTGAAGTTTCAAACTTAAATAAAGTCAAAGAAAGCTATACTGAGGAATCACTTCAGGATCCCAAGCGTAAAGTACATAAACCTGTCAAAGGAGTTTTAAGACTGGAAATTGAAAAGCACCAGATTTCTCAAGCTGATTTGGAAAACATGTCAGAATGCGGTAGTGCAACCAATGATTCTGTTGACCCCGGGGATCGCATTGCTGGTTCCATGTCTGGAAAGTATCCTAGTAATGGTTGTGATGATCCTCAGGGTAGTATCTCCAGGTGGAACTCCAGTGATGCGAAAGAAGTTCTGGGCAATGGAGCAAATCAACATGGAAACTCGGATTTGAATGCTGATGATTTCCATGCTTTTGACTTCCGCACAACAACAAGAAACGAGCCTTTTTTGCAACTTTTTCACTGCCTGTATGTGTATCCGTTGACTGTAAGTTTGGGTAGGAAAAGGAATTTGTTTATACGGGTTGAACTTAGAGAGGACGATGGTGATATTCGTAGACAGCCATTGGAGGCAATTTATCCTAGAGATCCAGCTTTAGGGACATCATTTCAGAAATGGGGTCACACCCAAGTTGCTGTTGGGGCTAGGGTTGCTTGCTACCATGACGAAATTAAACTTTCCCTTCCTGCCATGTGGACACCAACACACCATCTTCTATTTACTTTATTTCATGTTGATCTGCAAACAAAATCTGAAGCACCAAAGCCAGTGGTAATTGGATATGCAGCACTTCCTTTATCATCACATGCTCAGCTGCGGTCGGAAATAAATCTCCCGATTTTGAGAGAGTTGGTCCCACATTATCTCCAGGATGCAGGACGGGAGAGATTGGATTATTTAGAAGATGGGAAAAATGTCTTCAGACTGCGTTTACGGTTATGTTCTTCTTTATACCCTATCAATGAACGTATTAGAGATTTTTTTCTCGAATACGATCGACACACTCTCCGAACAAGTCCACCTTGGGGTTCTGAACTGCTAGAGGCTATTAATAGTTTGAAGAATGTTGATTCTACTGCTTTACTTCAGTTTCTTCACCCAATTCTTAACATGCTGCTTCATCTTATCGGCAATGGTGGAGAAACACTCCAGGTTGCGGCTTTCCGGGCTATGGTTAATATTGTAACCAGGGTGCAGCAGGAGTCAGTTGATGACGCTGAAAGAAATCATTTTCTAGTTAACTATGTTGATTGTGCTTTCGATGATTTTGGAGGTCGTCAACCACCAGTATACCCTGGATTATCCACTGTCTGGGGAAGTCTGGCACGAAGTAAGGCTAAAGGGTATCGTGTTGGACCAGTGTATGATGATGTTTTGGCAATGGCATGGTTTTTTCTTGAGTTAATTGTTAAATCAATGGCATTGGAGAAGACTCGCCTCTTCTATCATAGCCTACCAATAGGTGAAGATATCCCACCGATGCAGTTGAAGGATGGTGTATTCAGATGCATAATGCAGTTGTATGATTGCCTTCTCACTGAGGTGCATGAGCGCTGCAAGAAGGGTTTAAGCTTGGCAAAACGCTTGAACAGTAGTTTGGCCTTCTTTTGTTATGATCTTCTATCAATTATTGAGCCACGACAAGTTTTTGAGTTGGTATCGTTATATCTCGATAAGTTCTCTGGTGTATGTCAACCAGTTCTTCATGAGTGCAAACTTACCTTTCTACAAATAATCTGTGACCATGATCTTTTTGTTGAAATGCCTGGGAGAGACCCTTCAGATAGGAACTACCTTTCGTCTGTATTGATACAAGAACTCTTTGTTACTTGGGATCATGAAGATCTGTCTCTACGGGCAAAGGCAGCAAGAATCTTGGTAGTGCTCTTGTGCAAGCATGGATTTGATGTGAGATACCAAAAGCCTGAAGATAAGTTGTATATTGCTCAGCTATATTTGCCGGTTATTGGACAGATATTAGATGAGATGCCTGTTTTCTACAACCTGAATTCTGTTGAGAAACGGGAAGTTTCCATTGTAATTCTGGAAATAGTTCGAAACCTTGATGATGCATCACTTGTCAAGGCATGGCAGCAAAGCATTGCCCGGACTAGATTGTTTTTCAAGCTCATGGAGGAATGCTTACTTCTATTTGAGCACAAAAAGCCTGCTGATGGTATGTTACTTGGCTCTAGTTCTCGCAACCCTGTAGGGGAGACACCTGCTTCCCCCAAATACTCTGAGAGACTTTCACCTGCAATCAACAACTATCTATCTGAGGCCTCAAGGCAGGAAGTCAGGCCTCAGGGAACACCTGATAATGGGTATTTATGGCAGAGAGTAAATTCCCAGTTAAGCTCACCTAGCCAGCCATATTCCTTGAGAGAAGCTCTTGCCCAAGCACAGTCTTCTAGGATTGGAGCTTCTGCTCAAGCACTTCGAGAATCTTTGCACCCACTTTTGAGGCAAAAATTGGAACTATGGGAAGAAAATTTGAGCGCTTCTGTCAGTCTTCAGGTCTTGGAAGTGACTGAAAAATTTTCAACAATGGCAGCATCACATAGCATTGCCACAGATTATGGAAAACTTGATTGCATCACAGCTGTATTCATGAGCTTTCTATCTAGAAATCAGCCATTGTCTTTTTGGAAAGCATTTTTCCCTGTATTTAATAGTGTGTTTGATTTACATGGGGCAACACTAATGGCAAGAGAAAATGACCGTTTTCTAAAGCAAGTCACTTTCCATCTCCTTCGGCTTGCAGTTTTCAGAAATGACAATATCAGGAAAAGGGCAGTTGTTGGGCTTCAAATACTTGTGAGGTGTTCATTTCATTACTTTACACAGACAGCAAGGTTAAGAGTCATGTTGATCATCACTTTATCAGAGCTAATGTCTGATGTGCAAGTGACTCAAATGAGATCTGATGGAAGCCTAGAAGAGAGTGGTGAAGCACGGAGACTTAGAAAATCTTTAGAGGAAATGAAGGATGAAACTAAAAGTTCTTTCCTGTTGGAGGAGTGTGGATTACTTGATAGTGCTCTTATAGCCATACCAGAGAAAAAGGCAGAACATACATGGTCTTGGTCAGAGGTGAAATATCTTTCTGAAAGTCTGCTTTTGGCCCTTGATGGTAGCTTGGAACATGCACTACTGGCCCCTGTAATGACTATGGATAGATATGCTGCTGCTGAAAGCTTCTATAAACTGGCAATGGCATTTGCCCCAGTCCCTGATCTTCACATAATGTGGCTACTTCATCTGTGTGATGCACATCAGGAAATGCAGTCATGGGCTGAAGCTGCTCAATGTGCTGTTGCTGTTGCTGGTGTTGTAATGCAGGCCCTTGTTGCCAGAAGTGATGGTGTTTGGAACAAAGACCATGTTGCAGCTTTACGCAAGATTTGTCCTATGGTTAGCAGTGAGATCACGTGTGAAGCATCTGCTGCAGAGGTAGAGGGATATGGTGCTTCAAAACTAACAGTTGACTCTGCTGTGAAATACCTCCAGCTTGCTAATAAGCTTTTTTCACAAGCTGAGCTATTTCATTTCTGTGCAAGCATTCTGGAACTTGTAATCCCAGTATACAAGAGCAGGCGGGTTTATGGACAACTGGCTAAATGTCACACCTTACTTACTAATATCTATGAATCAATACTTGAACAGGAATCTAGTCCGATTCCTTTCACTGATGCAACATACTACAGGGTTGGGTTTTATGGTGATAGATTTGGAAAACTTGACAAAAAGGAGTATATATATCGGGAACCCCGTGATGTCCGTCTAGGGGACATAATGGAAAAACTCAGTCACATCTATGAATCCAGAATGGATGGTAATCACACTTTGCATATTATTCCAGATTCTAGACAAGTGAAGGCTGAGGAGCTACAGCCTGGTGTCTGCTACCTTCAGATCACTGCTGTTGATGCCGTCATGGAAGATGAGGATTTAGGAAGTAGAAGAGAGAGAATATTCTCTCTTTCTACTGGAAGTGTCCGTGCCCGTGTGTTTGACCGATTTTTGTTTGATACCCCATTTACAAAAAATGGCAAGAATCAAGGTGGATTGGAAGATCAATGGAAAAGACGCACTGTTCTTCAGACCGAGGGTTCATTTCCAGCTTTAGTAAATAGGCTATTGGTAATCAAATCCGAGTCCCTTGAATTTTCACCTGTAGAAAATGCCATTGGCATGATTGAAACACGAACAGCTGCATTACGAAATGAGCTTGAAGAGCCTAGAAGTTCTGAAGGGGATCAACTTCCAAGACTCCAGAGTCTACAAAGAATACTCCAAGGAAGCGTTGCAGTACAAGTAAATAGTGGAGTTTTGAGTGTTTGCACAGCCTTCTTGTCTGGCGAGCCTGCTACAAGATTGCGGTCTCAGGAACTACAGCAACTTATAGCTGCCCTTCTTGAGTTCATGGCTGTTTGCAAACGTGCAATCCGAGTACATTTCAGATTGATAGGTGAGGAAGATCAGGATTTCCATACACAACTTGTAAATGGATTTCAGTCTCTAACTGCTGAGTTATCACATTACATTCCTGCCATTCTCTCAGAGCTATGA 5511 0.4246 MLHLRHRRDSTPATTKWRNKFDENLEQWPHLNELVHCYTTDWVKDENKYGHYESIGTPSFQNQIYEGPDTDIETEMRLAGARRTKGEDISEDDIPSTSGRQFMENADGEHSDVSKHFGQSPLPAYEPAFDWENERSLIFGQRIPETPISHGMKISVKVQSLQFQAGLSEPFYGTICLYNRERREKLSEDFYFHIIPTEIQDARITCDPRTIFYLDAPSASVCLLIQLEKHATEEGGVTPSVYSRKDTAHLTEREKQKLQVWSKIMPYKESFAWAIVSLFDGSIGAASVGPGSPSSPLAPSVSGSSSHEGVFETSTKVSLDGKLNYSNGNSVVVEVSNLNKVKESYTEESLQDPKRKVHKPVKGVLRLEIEKHQISQADLENMSECGSATNDSVDPGDRIAGSMSGKYPSNGCDDPQGSISRWNSSDAKEVLGNGANQHGNSDLNADDFHAFDFRTTTRNEPFLQLFHCLYVYPLTVSLGRKRNLFIRVELREDDGDIRRQPLEAIYPRDPALGTSFQKWGHTQVAVGARVACYHDEIKLSLPAMWTPTHHLLFTLFHVDLQTKSEAPKPVVIGYAALPLSSHAQLRSEINLPILRELVPHYLQDAGRERLDYLEDGKNVFRLRLRLCSSLYPINERIRDFFLEYDRHTLRTSPPWGSELLEAINSLKNVDSTALLQFLHPILNMLLHLIGNGGETLQVAAFRAMVNIVTRVQQESVDDAERNHFLVNYVDCAFDDFGGRQPPVYPGLSTVWGSLARSKAKGYRVGPVYDDVLAMAWFFLELIVKSMALEKTRLFYHSLPIGEDIPPMQLKDGVFRCIMQLYDCLLTEVHERCKKGLSLAKRLNSSLAFFCYDLLSIIEPRQVFELVSLYLDKFSGVCQPVLHECKLTFLQIICDHDLFVEMPGRDPSDRNYLSSVLIQELFVTWDHEDLSLRAKAARILVVLLCKHGFDVRYQKPEDKLYIAQLYLPVIGQILDEMPVFYNLNSVEKREVSIVILEIVRNLDDASLVKAWQQSIARTRLFFKLMEECLLLFEHKKPADGMLLGSSSRNPVGETPASPKYSERLSPAINNYLSEASRQEVRPQGTPDNGYLWQRVNSQLSSPSQPYSLREALAQAQSSRIGASAQALRESLHPLLRQKLELWEENLSASVSLQVLEVTEKFSTMAASHSIATDYGKLDCITAVFMSFLSRNQPLSFWKAFFPVFNSVFDLHGATLMARENDRFLKQVTFHLLRLAVFRNDNIRKRAVVGLQILVRCSFHYFTQTARLRVMLIITLSELMSDVQVTQMRSDGSLEESGEARRLRKSLEEMKDETKSSFLLEECGLLDSALIAIPEKKAEHTWSWSEVKYLSESLLLALDGSLEHALLAPVMTMDRYAAAESFYKLAMAFAPVPDLHIMWLLHLCDAHQEMQSWAEAAQCAVAVAGVVMQALVARSDGVWNKDHVAALRKICPMVSSEITCEASAAEVEGYGASKLTVDSAVKYLQLANKLFSQAELFHFCASILELVIPVYKSRRVYGQLAKCHTLLTNIYESILEQESSPIPFTDATYYRVGFYGDRFGKLDKKEYIYREPRDVRLGDIMEKLSHIYESRMDGNHTLHIIPDSRQVKAEELQPGVCYLQITAVDAVMEDEDLGSRRERIFSLSTGSVRARVFDRFLFDTPFTKNGKNQGGLEDQWKRRTVLQTEGSFPALVNRLLVIKSESLEFSPVENAIGMIETRTAALRNELEEPRSSEGDQLPRLQSLQRILQGSVAVQVNSGVLSVCTAFLSGEPATRLRSQELQQLIAALLEFMAVCKRAIRVHFRLIGEEDQDFHTQLVNGFQSLTAELSHYIPAILSEL 1836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01715 1836 CDD C2_DOCK180_related 465 637 - -
Trre15g01715 1836 Gene3D C2 domain 467 636 IPR035892 -
Trre15g01715 1836 ProSiteProfiles C2 DOCK-type domain profile. 466 627 IPR027007 -
Trre15g01715 1836 MobiDBLite consensus disorder prediction 293 309 - -
Trre15g01715 1836 Pfam C2 domain in Dock180 and Zizimin proteins 465 635 IPR027007 -
Trre15g01715 1836 FunFam Guanine nucleotide exchange factor SPIKE 1 1704 1831 - -
Trre15g01715 1836 SUPERFAMILY ARM repeat 663 1253 IPR016024 -
Trre15g01715 1836 PANTHER DEDICATOR OF CYTOKINESIS DOCK 20 1830 IPR026791 GO:0005085|GO:0007264
Trre15g01715 1836 Pfam DHR-2, Lobe A 1381 1534 IPR046769 -
Trre15g01715 1836 Gene3D - 1704 1831 IPR043162 -
Trre15g01715 1836 Pfam DHR-2, Lobe B 1602 1684 IPR046770 -
Trre15g01715 1836 Pfam DHR-2, Lobe C 1731 1828 IPR046773 -
Trre15g01715 1836 MobiDBLite consensus disorder prediction 289 309 - -
Trre15g01715 1836 CDD DHR2_DOCK 1392 1825 - -
Trre15g01715 1836 Gene3D - 1386 1539 IPR043161 -
Trre15g01715 1836 ProSiteProfiles DOCKER domain profile. 1385 1834 IPR027357 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01715 Trre-Chr15 13688403 13714987 Dispersed/Wgd