Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01590 ATGGATATTGAATTTGAGGATACACAAGCAGTTTCTGATATGATTCCAAGCAATCAACAGAGGAAAAAACAGTCATTTATCTGGAAAGTGTTGACCATGAGAGAAAGAATTGGAAGAACAATGGAAAGAGGTTCAATTGATTCTCATGAAGCACTTTCTGATTTATCTATCCAAAATCAAGGCTCAGTATCTTCCATGTCTTCTTGTGAAGCAGTTCAGAATTTTAGAGTTTTTGCTGCAACATGGAATGTTGGAGGTCAATGTCCTAGTGGGAATCTTGATCTGAGTGATTTTCTTCAGGTTCAAAATGAACCAGATATGTATGTTTTAGGCTTTCAGGAGATTGTACCTTTGAATGCTGGAAATGTGCTTGTATTAGAAGACAATGAACCTGCTGCAAAATGGCTAACCTTAATAAATCAATCGCTCAACGGTCCTTCAGATTTCACTTCTAACGGACTAAAACCAAAGCCGTCTCTAAAGAAGATTAAGAAAACTTTCAAGAAATTGAATGGAAAGAGGCTAAAAAGTTGTAACTGCGTACTCGAAATGGAAAGAAAGGCTGCTAAGGATTTCTGTTTTCGATGCCAAGAATCAAACTTCAATTTATATGATTCTTCAACCGAAGAGGAAGATGACAATTTCCCAATTTCTGTCGCTTTGGCTACGAATCAGATGAAATATAGTCTTGTTACCTGTAAACAAATGGTTGGAATTTTCGTTAGTGTATGGATGAAGAAAGAACTTATTCAATATGTAGGACATTTAAGAATATGTTGCACTAGTCGCGGTATCATGGGATGTCTCGGAAACAAGGGATGTATATCTGTGAGCATGTCATTTTATCAGACAAGTTTTTGCTTTATCTGCAGTCATCTGGCGTCAGGAGAGAAAGAGGGCGATGAGCTACGTCGAAATCTTGATGTCATAGAGATATTAAAGAACACTCAGTTTCCGAAGATTTGCAAGAATCAGTATAGTAGGATGCCAGACAAAATTTTAGATCACGACCGAATTATTTGGTTTGGAGACTTGAATTACAGAATTTCTTTGAGCCGCGATGACGCAAAAAGGCTTGTGGAAATGAAGGATTGGCCCTCACTTTTTAACAAGGATCAGCTTAAAATGGAAAGGGAAGCCGGTCGAGTGTTTAAGGGATGGAAAGAGGGAAAAATCTACTTTGCACCTACTTATAAATATGCCTTCAACTCAGATACTTACTATGCTGAAGGTGTAAAGGTTTCAAAGAACAAAAGAAGAACTCCGGCTTGGTGTGATAGAATCTTGTGGCATGGAAGGGGAATACAACAACTCTCATACGTGCGTAAAGAATTCAAATTTTCTGACCATAGACCAGTTTGTGCAACATTTTTGGTAGAAGTGGAAGTCATGTTTAGGGGACAAAAGAAGAAAGTTTCCAATTTCAACTTTCAAATTGATGATCTTGTACCTACAAGAAATTCATATTATTCTTGA 1476 0.3733 MDIEFEDTQAVSDMIPSNQQRKKQSFIWKVLTMRERIGRTMERGSIDSHEALSDLSIQNQGSVSSMSSCEAVQNFRVFAATWNVGGQCPSGNLDLSDFLQVQNEPDMYVLGFQEIVPLNAGNVLVLEDNEPAAKWLTLINQSLNGPSDFTSNGLKPKPSLKKIKKTFKKLNGKRLKSCNCVLEMERKAAKDFCFRCQESNFNLYDSSTEEEDDNFPISVALATNQMKYSLVTCKQMVGIFVSVWMKKELIQYVGHLRICCTSRGIMGCLGNKGCISVSMSFYQTSFCFICSHLASGEKEGDELRRNLDVIEILKNTQFPKICKNQYSRMPDKILDHDRIIWFGDLNYRISLSRDDAKRLVEMKDWPSLFNKDQLKMEREAGRVFKGWKEGKIYFAPTYKYAFNSDTYYAEGVKVSKNKRRTPAWCDRILWHGRGIQQLSYVRKEFKFSDHRPVCATFLVEVEVMFRGQKKKVSNFNFQIDDLVPTRNSYYS 491
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01590 491 PANTHER TYPE IV INOSITOL POLYPHOSPHATE 5-PHOSPHATASE 9 56 473 IPR045849 GO:0004445
Trre15g01590 491 Gene3D Endonuclease/exonuclease/phosphatase 54 483 IPR036691 -
Trre15g01590 491 SMART i5p_5 73 465 IPR000300 GO:0016791|GO:0046856
Trre15g01590 491 Pfam Endonuclease/Exonuclease/phosphatase family 80 450 IPR005135 GO:0003824
Trre15g01590 491 SUPERFAMILY DNase I-like 69 475 IPR036691 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01590 Trre-Chr15 12767351 12771625 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trre15g01590 234 471 Acyl Lipid Metabolism Gene Families AT2G43900 27.437 2.84e-27 114