Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01582 ATGGATCATATGAAAGAGCCATTGTTGGAGAAGAAGCAATATTATAAGGATTGTCCTGGTTGTAAGGTTGAACAAGAAAAAGAACTTAATCAAGGGGTATCCATTATAAAGCTTTTGATTATTTGGATGGTGGTGTTATCTGCTACACTTCCTGCAGCATCACTCTTTCCATTCCTTTACTTCATGGTAAGGGATTTCCATGTTGCAAAACAAGAGGCTGATATTAGTTATTATGCCGGTTATGTGGGATCTTCATTCATGCTTGGAAGATCTTTAACATCTGTAGCTTGGGGTATGGTTTCTGATCGATATGGTCGAAAACCTGTTATAATTCTTGGGGTCATCGCAGTTGTCATCTTCAACACACTATTTGGCCTAAGTACGAATTTTTGGATGGCTATTATCACGAGATTTCTTCTCGGAAGTTTAAACGGTGTACTTGGACCAGTGAAGGCATATGCTACTGAACTTTTTAGAGAAGAGCACCAAGCTATAGGTCTTTCTACTGTTAGTGCCGCTTGGGGCATTGGTTTAATTATTGGCCCGGCAATAGGAGGTTATTTGGCTCAGCCAGCAGAAAAATATCCACAATTATTTGCAAAGGATTCATTTTGGGATAAGTTTCCATATTTCTTGCCTTGCTTCATAATATCAGGACTTGCACTGACAGTAGCAATTGCCTGCATCTGGATTCCGGAAACACTTCACAATCACAGTGGCAGTAATGAGTCTACAGATGATGCTGAAGCTTTAGAAAATGGAAGCGAAAGAGTAGACAAAGAAAAAAATGTCCAAAAGAATGAAAACCTCTTCATGAATTGGCCTTTGATGTCATCTATCATTGCTTATTCTGTCTTCTCACTTCATGATGTTGCTTATCAAGAGGTTTTCTCATTATGGGCTGTTAGTCCTCCAAAGTTAGGGGGGTTGAACTTTTCAACAGATGATGTCGGTAACGTTCTTTCAATTTCAGGACTTGCACTTGTCATCTACCAAATTTTCGTATACCCATCTGTAGAAAAAGCTTGTGGACCTATCGCCTTTGCTCGCATCACAGGGATATTTTCTATACCACTTTTGCAAAGTTACCCTTTGATCGCAATGTTGTCGGGCATAAGCTTATACATAGTCATTAGTATCGCTTCGATGCTGAAGAATGTTATGTCTGTGACAATTACGACAGGTTTATTCCTAATACAAAACCGAGTAGTGGAACAACACCAAAGAGGAGCAGCTAATGGAATTTCCATGACAGCTATGTCGTTCTTCAAAGCTATTGGCCCTGCTGCAGGTGGAACAATATTAACTTGGTCACAAAAGCGGATGGATGCATCGATCCTCCCCGGCACTCAAATGGTCTTTTTCTTCTTGAATTTAGTTGAAGGACTTGGAATAATTTTGATGTTTAAACCATTCCTTCCTCAAAAGAAGAAAACACACTCAGATTTATTACAGTAA 1458 0.3937 MDHMKEPLLEKKQYYKDCPGCKVEQEKELNQGVSIIKLLIIWMVVLSATLPAASLFPFLYFMVRDFHVAKQEADISYYAGYVGSSFMLGRSLTSVAWGMVSDRYGRKPVIILGVIAVVIFNTLFGLSTNFWMAIITRFLLGSLNGVLGPVKAYATELFREEHQAIGLSTVSAAWGIGLIIGPAIGGYLAQPAEKYPQLFAKDSFWDKFPYFLPCFIISGLALTVAIACIWIPETLHNHSGSNESTDDAEALENGSERVDKEKNVQKNENLFMNWPLMSSIIAYSVFSLHDVAYQEVFSLWAVSPPKLGGLNFSTDDVGNVLSISGLALVIYQIFVYPSVEKACGPIAFARITGIFSIPLLQSYPLIAMLSGISLYIVISIASMLKNVMSVTITTGLFLIQNRVVEQHQRGAANGISMTAMSFFKAIGPAAGGTILTWSQKRMDASILPGTQMVFFFLNLVEGLGIILMFKPFLPQKKKTHSDLLQ 485
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01582 485 PANTHER MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 35 469 - -
Trre15g01582 485 ProSiteProfiles Major facilitator superfamily (MFS) profile. 37 476 IPR020846 GO:0022857
Trre15g01582 485 FunFam Protein ZINC INDUCED FACILITATOR-LIKE 1 36 468 - -
Trre15g01582 485 SUPERFAMILY MFS general substrate transporter 38 480 IPR036259 -
Trre15g01582 485 Gene3D MFS general substrate transporter like domains 36 467 IPR036259 -
Trre15g01582 485 PRINTS Tetracycline resistance protein signature 167 189 IPR001958 GO:0022857
Trre15g01582 485 PRINTS Tetracycline resistance protein signature 110 134 IPR001958 GO:0022857
Trre15g01582 485 CDD MFS_SLC46_TetA_like 41 470 - -
Trre15g01582 485 Pfam Major Facilitator Superfamily 42 283 IPR011701 GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01582 Trre-Chr15 12709941 12713865 Dispersed/Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g01582 15 12709941 12713865 Trre15g01582 15 12709941 12713865 ECH