Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trre15g01581 ATGAGTGAGGAGTATATGAGAGAGCCATTGTTGGAGAAAAAAAATTACTATAAAGATTGTCCTGGTTGTAAGGTGGAACAATCCAAAGAGCTTAATCAAGGAATATCCATTACAAATCTTTTCATCATATGGATGGTGGTGTTATGTTCAACATTGCCTGCATCATCACTCTTTCCATTCCTTTATTTCATGATTAGGGATTTTAAAATTGCAAAAGACGAGGCTGATATTAGTTACTATGCCGGTTATGTAGGATCATCTTTTATGCTTGGAAGAACTTTGACGTCTGTATTATGGGGAATGGTTTCTGATCGCTATGGTCGAAAACCTGTTATAATTTTCGGCGTTTTCACAGTTGTGGTTTTCAACACACTATTTGGCTTAAGTACAAGTTTTTGGATGGCCGTTATCACAAGATTTCTTTTGGGATGTTTAAATGGTGCAATTGGACCAGTAAAGGCTTATGCTACTGAACTTTTTCGAGAAGAACACCAAGCTCTTGGACTCTCTACTGTTAGTGCAGCTTGGGGAACAGGTTTAATCATTGGACCAGCATTGGGAGGCTATTTGGCTCTGCCAGCAGAGAAATATCCACATATATTTCCAAAGGGTTCCTTCTTGGATAAGTTTCCTTACTTCTTGCCGTGCTTTATAATATCAGGAGTTTCATTTGTTGTAGTTATCGCCTGCTTGTGGATTCCGGAAACACTTCACAATCACAATGGCAGCGATGCTGATGAGTCTATAGATGATGTTGAAGCTATAGAAAATGGAACCAACGAGGTTGATAAAGAAAAGACAGTACAAAATAATGAAAATCTCTTCATGAATTGGCCATTAATGTCATCTATCATTGCTTATTGTGTCTTCTCACTTCATGATATTGCCTATCAAGAGGTTTTCTCTTTGTGGTCTGTTAGTCCTCCAAGTCTAGGAGGTTTGAACTTCTCAACTGATGATGTTGGTAATGTTCTTGCAATTTCAGGTCTAGCACTTGTGATCTACCAACTTACCCTATATCAATATATGGAAAAAGCTTGTGGACCTGTTGGCATTGCTCGAATCACAGGGATATGTTCAATACCACTTTTGCAAAGTTATCCCTTCATAGCAATGTTGTCGGGCATAACCTTATACATAGTCATTAGTATTGCTTCCATCCTCAAGAATATTGTCTCAGTGACGATTACAACAGGTTTATTCCTTATACAAAACCGAGTAGTGGAACAACACCAAAGAGGGGCAGCTAATGGCATTTCTATGACAGCTATGTCGTTATTCAAAGCTATTGGCCCTGCTGCAGGTGGAACAATATTAACTTGGTCACAAAAGCGTCTGGATGCTGCTTTTCTCCCAGGCACCCATATGGTCTTTTTCTTCCTAAATTTAGTTGAAGGACTAGGTATACTTATGATGTTCAAACCATTCCTTGGAGAGAAGAAAACACATTCAGATCAGTTGCACTGA 1467 0.3879 MSEEYMREPLLEKKNYYKDCPGCKVEQSKELNQGISITNLFIIWMVVLCSTLPASSLFPFLYFMIRDFKIAKDEADISYYAGYVGSSFMLGRTLTSVLWGMVSDRYGRKPVIIFGVFTVVVFNTLFGLSTSFWMAVITRFLLGCLNGAIGPVKAYATELFREEHQALGLSTVSAAWGTGLIIGPALGGYLALPAEKYPHIFPKGSFLDKFPYFLPCFIISGVSFVVVIACLWIPETLHNHNGSDADESIDDVEAIENGTNEVDKEKTVQNNENLFMNWPLMSSIIAYCVFSLHDIAYQEVFSLWSVSPPSLGGLNFSTDDVGNVLAISGLALVIYQLTLYQYMEKACGPVGIARITGICSIPLLQSYPFIAMLSGITLYIVISIASILKNIVSVTITTGLFLIQNRVVEQHQRGAANGISMTAMSLFKAIGPAAGGTILTWSQKRLDAAFLPGTHMVFFFLNLVEGLGILMMFKPFLGEKKTHSDQLH 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trre15g01581 488 SUPERFAMILY MFS general substrate transporter 39 476 IPR036259 -
Trre15g01581 488 FunFam Protein ZINC INDUCED FACILITATOR-LIKE 1 38 472 - -
Trre15g01581 488 CDD MFS_SLC46_TetA_like 43 474 - -
Trre15g01581 488 ProSiteProfiles Major facilitator superfamily (MFS) profile. 39 480 IPR020846 GO:0022857
Trre15g01581 488 PANTHER MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN 10 35 473 - -
Trre15g01581 488 Pfam Major Facilitator Superfamily 43 432 IPR011701 GO:0022857|GO:0055085
Trre15g01581 488 Gene3D MFS general substrate transporter like domains 37 464 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trre15g01581 Trre-Chr15 12694330 12697930 Tandem
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Trre15g01581 15 12694330 12697930 Trre15g01581 15 12694330 12697930 ECH
Trre5g00184 5 1119152 1125087 Trre15g01581 15 12694330 12697930 PCT